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Carg08954 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08954
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCRIB domain-containing protein RIC7
Genome locationCarg_Chr02:9654741..9655133
RNA-Seq ExpressionCarg08954
SyntenyCarg08954
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606364.1 hypothetical protein SDJN03_03681, partial [Cucurbita argyrosperma subsp. sororia]3.2e-57100Show/hide
Query:  MADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAAD
        MADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAAD
Subjt:  MADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAAD

Query:  ICSSQFSDNGSDAISRSNDDDLLTGDGVFT
        ICSSQFSDNGSDAISRSNDDDLLTGDGVFT
Subjt:  ICSSQFSDNGSDAISRSNDDDLLTGDGVFT

XP_022931172.1 CRIB domain-containing protein RIC7 [Cucurbita moschata]1.5e-5498.44Show/hide
Query:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
        DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSEL  GGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
Subjt:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC

Query:  SSQFSDNGSDAISRSNDDDLLTGDGVFT
        SSQFSDNGSDAISRSNDDDLLTGDGVFT
Subjt:  SSQFSDNGSDAISRSNDDDLLTGDGVFT

XP_022996156.1 CRIB domain-containing protein RIC7 [Cucurbita maxima]2.5e-5497.66Show/hide
Query:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
        DTNHTARDMPE+PKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSEL QGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
Subjt:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC

Query:  SSQFSDNGSDAISRSNDDDLLTGDGVFT
        SSQFS+NGSDAISRSNDDDLLTGDGVFT
Subjt:  SSQFSDNGSDAISRSNDDDLLTGDGVFT

XP_023532935.1 CRIB domain-containing protein RIC7-like [Cucurbita pepo subsp. pepo]8.7e-3998.99Show/hide
Query:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADI
        DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSEL QGGESGAPKKARRKKSKEDGSTRSRSKGAAADI
Subjt:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADI

XP_038888498.1 CRIB domain-containing protein RIC7-like [Benincasa hispida]4.2e-3372.99Show/hide
Query:  TARDMPEIPKASRRQSSTVGGSAGDSP-TREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA
        T RD+PE+PK+SRRQSSTVGGS G+SP TREKSEKT+SKKSSKSKESS+SD    S RSS+L QG ES      G PKKARRKKSKE+GSTRSRSK  A 
Subjt:  TARDMPEIPKASRRQSSTVGGSAGDSP-TREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA

Query:  DICSSQFSDNGSDA------ISRSNDDDLLTGDGVFT
        + CSSQ SDNGSDA      ISRSNDDDLLTGDGVFT
Subjt:  DICSSQFSDNGSDA------ISRSNDDDLLTGDGVFT

TrEMBL top hitse value%identityAlignment
A0A0A0L7D1 CRIB domain-containing protein5.9e-3369.92Show/hide
Query:  TARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA
        T+RDMPE+PK+S+RQSSTVGGS  +SPT R+KSEK +SKKSSK++ESS+SD I PS R+S+L QG ES      G PKK RRKKSKE+GST+SRSK  AA
Subjt:  TARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA

Query:  DICSSQFSDNGSD--AISRSNDDDLLTGDGVFT
        + CSSQFS+N SD  +ISRSNDDDLLTGDGVFT
Subjt:  DICSSQFSDNGSD--AISRSNDDDLLTGDGVFT

A0A1S3BHX9 CRIB domain-containing protein RIC6-like7.7e-3370.68Show/hide
Query:  TARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA
        T+RD+PE+PK+SRRQSST+GG+  +SPT R+KSEK +SKKSSK+KESS+SD + PS R+S+L QG ES      G PKKARRKKSKE+GSTRSRSK  AA
Subjt:  TARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA

Query:  DICSSQFSDNGSD--AISRSNDDDLLTGDGVFT
        + CSSQFS+NGSD  +ISRSNDDDLLTGDGVFT
Subjt:  DICSSQFSDNGSD--AISRSNDDDLLTGDGVFT

A0A5A7T947 CRIB domain-containing protein RIC6-like7.7e-3370.68Show/hide
Query:  TARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA
        T+RD+PE+PK+SRRQSST+GG+  +SPT R+KSEK +SKKSSK+KESS+SD + PS R+S+L QG ES      G PKKARRKKSKE+GSTRSRSK  AA
Subjt:  TARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGES------GAPKKARRKKSKEDGSTRSRSKGAAA

Query:  DICSSQFSDNGSD--AISRSNDDDLLTGDGVFT
        + CSSQFS+NGSD  +ISRSNDDDLLTGDGVFT
Subjt:  DICSSQFSDNGSD--AISRSNDDDLLTGDGVFT

A0A6J1ESW1 CRIB domain-containing protein RIC77.2e-5598.44Show/hide
Query:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
        DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSEL  GGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
Subjt:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC

Query:  SSQFSDNGSDAISRSNDDDLLTGDGVFT
        SSQFSDNGSDAISRSNDDDLLTGDGVFT
Subjt:  SSQFSDNGSDAISRSNDDDLLTGDGVFT

A0A6J1K3X0 CRIB domain-containing protein RIC71.2e-5497.66Show/hide
Query:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
        DTNHTARDMPE+PKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSEL QGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC
Subjt:  DTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADIC

Query:  SSQFSDNGSDAISRSNDDDLLTGDGVFT
        SSQFS+NGSDAISRSNDDDLLTGDGVFT
Subjt:  SSQFSDNGSDAISRSNDDDLLTGDGVFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03982.1 PAK-box/P21-Rho-binding family protein7.4e-0440.37Show/hide
Query:  ARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSK---EDGSTRSRSKGAAADICSS
        +RD+P +PK+SR +SST+GG    SPT+E+S +  S + + + + S     R S  SS +PQ G  G  KK+RRKKSK   + GS RS  +   + + S 
Subjt:  ARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSK---EDGSTRSRSKGAAADICSS

Query:  QFSDNGSDA
          S + SDA
Subjt:  QFSDNGSDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATACGAACCACACGGCTCGGGATATGCCGGAGATACCAAAAGCATCGAGAAGACAGTCATCAACTGTCGGCGGCAGTGCGGGGGATTCTCCGACAAGGGAGAA
ATCGGAGAAGACAAGGTCAAAGAAATCTTCAAAGTCCAAGGAATCGTCTACGTCGGATGGCATTAGACCGTCGCATCGGAGCTCCGAACTGCCCCAGGGCGGCGAGTCGG
GGGCTCCGAAGAAAGCGCGACGGAAGAAATCGAAGGAAGACGGATCGACGAGATCGAGATCAAAAGGTGCGGCGGCGGATATTTGTTCATCTCAATTCTCCGATAACGGG
TCGGACGCCATTTCCAGATCCAACGACGATGACTTGTTAACGGGAGATGGGGTTTTTACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATACGAACCACACGGCTCGGGATATGCCGGAGATACCAAAAGCATCGAGAAGACAGTCATCAACTGTCGGCGGCAGTGCGGGGGATTCTCCGACAAGGGAGAA
ATCGGAGAAGACAAGGTCAAAGAAATCTTCAAAGTCCAAGGAATCGTCTACGTCGGATGGCATTAGACCGTCGCATCGGAGCTCCGAACTGCCCCAGGGCGGCGAGTCGG
GGGCTCCGAAGAAAGCGCGACGGAAGAAATCGAAGGAAGACGGATCGACGAGATCGAGATCAAAAGGTGCGGCGGCGGATATTTGTTCATCTCAATTCTCCGATAACGGG
TCGGACGCCATTTCCAGATCCAACGACGATGACTTGTTAACGGGAGATGGGGTTTTTACATAA
Protein sequenceShow/hide protein sequence
MADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELPQGGESGAPKKARRKKSKEDGSTRSRSKGAAADICSSQFSDNG
SDAISRSNDDDLLTGDGVFT