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Carg08986 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08986
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSignal recognition particle 9 kDa protein
Genome locationCarg_Chr02:9796503..9797009
RNA-Seq ExpressionCarg08986
SyntenyCarg08986
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0045900 - negative regulation of translational elongation (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR008832 - Signal recognition particle, SRP9 subunit
IPR009018 - Signal recognition particle, SRP9/SRP14 subunit
IPR039432 - SRP9 domain
IPR039914 - Signal recognition particle SRP9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571487.1 Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1897.87Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

KAG7036337.1 Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-19100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

XP_022930934.1 signal recognition particle 9 kDa protein-like [Cucurbita moschata]8.1e-19100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

XP_022967500.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima]1.1e-1897.87Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

XP_023554094.1 signal recognition particle 9 kDa protein-like [Cucurbita pepo subsp. pepo]1.1e-1897.87Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

TrEMBL top hitse value%identityAlignment
A0A6J1CY87 Signal recognition particle 9 kDa protein1.1e-1897.87Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYI SWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

A0A6J1EY60 Signal recognition particle 9 kDa protein3.9e-19100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

A0A6J1HI87 Signal recognition particle 9 kDa protein5.1e-1997.87Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

A0A6J1HSA1 Signal recognition particle 9 kDa protein5.1e-1997.87Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

A0A6J1K1A1 Signal recognition particle 9 kDa protein3.9e-19100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

SwissProt top hitse value%identityAlignment
O04438 Signal recognition particle 9 kDa protein3.5e-1780.85Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVY+ SW+EFVERSVQLFR DPN+TRY +KYRHC+GKLVLKVTD+RE
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

P21262 Signal recognition particle 9 kDa protein6.9e-0542.22Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDN
        M    +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDN

P34642 Signal recognition particle 9 kDa protein1.1e-0544.44Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDN
        M Y  SWDEF + + +L  ++P   R+  KY H  G+LVLK+TD+
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDN

Q55GL2 Signal recognition particle 9 kDa protein1.6e-0954.55Show/hide
Query:  VYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDN
        +YI  WDEF ++S QL+R+DP  TR++ K+RH +GK+VLKVT++
Subjt:  VYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDN

Q9SMU7 Signal recognition particle 9 kDa protein1.4e-1887.23Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+E
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE

Arabidopsis top hitse value%identityAlignment
AT3G49100.1 Signal recognition particle, SRP9/SRP14 subunit1.0e-1987.23Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE
        MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+E
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTACATTGCCTCATGGGATGAATTCGTCGAGCGTTCTGTGCAATTGTTCCGTTCCGATCCCAATTCCACGCGGTACAACATTAAGTATCGGCACTGCGATGGGAA
ACTGGTTCTCAAGGTCACCGATAACCGTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTACATTGCCTCATGGGATGAATTCGTCGAGCGTTCTGTGCAATTGTTCCGTTCCGATCCCAATTCCACGCGGTACAACATTAAGTATCGGCACTGCGATGGGAA
ACTGGTTCTCAAGGTCACCGATAACCGTGAG
Protein sequenceShow/hide protein sequence
MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRE