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Carg09008 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09008
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L2
Genome locationCarg_Chr11:2078524..2079569
RNA-Seq ExpressionCarg09008
SyntenyCarg09008
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8364945.1 hypothetical protein HHK36_033024 [Tetracentron sinense]4.0e-0466.67Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
        G F+K + DSETWD GLA NEG+L+E+SP  AYVVV
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
KAG7021741.1 hypothetical protein SDJN02_15468 [Cucurbita argyrosperma subsp. argyrosperma]9.1e-33100Show/hide
Query:  MGFWFCLFGVKLRRKIHEKAMKMLKKEMKKLDFVLQGSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ
        MGFWFCLFGVKLRRKIHEKAMKMLKKEMKKLDFVLQGSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ
Subjt:  MGFWFCLFGVKLRRKIHEKAMKMLKKEMKKLDFVLQGSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ
OVA06704.1 Ribosomal protein L2 [Macleaya cordata]1.8e-0465.79Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ
        G F+K + DSETWD GLA NEG+L+E+SP  AYVVV Q
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ
XP_022866432.1 uncharacterized protein LOC111386211 [Olea europaea var. sylvestris]4.0e-0466.67Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
        G F+K + DSETWD GLA NEG+L+E+SP  AYVVV
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
XP_023521202.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo]1.6e-0575Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
        G F+K + DSETWD GLA NEGELKE+SP VAYVVV
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
TrEMBL top hitse value%identityAlignment
A0A200Q8E8 Ribosomal protein L28.6e-0565.79Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ
        G F+K + DSETWD GLA NEG+L+E+SP  AYVVV Q
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ
A0A2G2Z8H8 Uncharacterized protein7.3e-0463.89Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
        G F+K + DSETWD GL  NEG+L E+SP VAY+VV
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVV
A0A2G3CX84 Uncharacterized protein5.6e-0464.86Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVE
        G FKK + DSETWD GL  NEG+L EISP   YVVV+
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVE
A0A3S3N1M2 Ribosomal protein L25.6e-0465.71Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVV
        G F+K + DSETWD GLA NEG+L+E+SP  AYVV
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVV
A0A5A7SUL2 60s ribosomal protein l24.3e-0468.57Show/hide
Query:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVV
        G F+K + DSETWD GL RNEGEL  +SP VAYVV
Subjt:  GSFKKVQVDSETWDFGLARNEGELKEISPKVAYVV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTTGGTTTTGTCTGTTTGGAGTGAAACTGAGAAGGAAAATTCATGAGAAGGCGATGAAGATGCTGAAGAAGGAGATGAAGAAGCTGGACTTTGTTCTTCAAGG
ATCCTTCAAAAAAGTGCAAGTTGACTCGGAGACCTGGGACTTTGGCTTAGCAAGGAATGAAGGGGAGCTCAAAGAGATTTCTCCCAAAGTGGCTTATGTAGTGGTCGAAC
AGTAG
mRNA sequenceShow/hide mRNA sequence
AGACAAATCAATGGTGAAGGAAGATGGGGTTTTGGTTTTGTCTGTTTGGAGTGAAACTGAGAAGGAAAATTCATGAGAAGGCGATGAAGATGCTGAAGAAGGAGATGAAG
AAGCTGGACTTTGTTCTTCAAGGATCCTTCAAAAAAGTGCAAGTTGACTCGGAGACCTGGGACTTTGGCTTAGCAAGGAATGAAGGGGAGCTCAAAGAGATTTCTCCCAA
AGTGGCTTATGTAGTGGTCGAACAGTAGAAAGCTCGCTAGGTTTCGCTTCCCTCCCTTTCCTTTTTCAATGAAGTGAAAAGGTATTCTACCAGTGACTTGTGGAGTCAAC
GAAAGATTCAAGTACCAAATTTAGA
Protein sequenceShow/hide protein sequence
MGFWFCLFGVKLRRKIHEKAMKMLKKEMKKLDFVLQGSFKKVQVDSETWDFGLARNEGELKEISPKVAYVVVEQ