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Carg09015 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09015
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationCarg_Chr11:2041661..2042064
RNA-Seq ExpressionCarg09015
SyntenyCarg09015
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653160.1 hypothetical protein Csa_019870 [Cucumis sativus]2.8e-3080.39Show/hide
Query:  LIHSFPSHSPTKVASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYY
        +IHS  +HS   +AS TL L LLFSASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY
Subjt:  LIHSFPSHSPTKVASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYY

Query:  VS
        +S
Subjt:  VS

KAG7021734.1 putative xyloglucan endotransglucosylase/hydrolase protein 23, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-51100Show/hide
Query:  MEFLGIPLSLIHSFPSHSPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAG
        MEFLGIPLSLIHSFPSHSPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAG
Subjt:  MEFLGIPLSLIHSFPSHSPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAG

Query:  TVTAYYVSLLV
        TVTAYYVSLLV
Subjt:  TVTAYYVSLLV

NP_001267702.1 probable xyloglucan endotransglucosylase/hydrolase protein 23-like precursor [Cucumis sativus]8.3e-3085.56Show/hide
Query:  VASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS
        +AS TL L LLFSASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+S
Subjt:  VASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS

XP_022987545.1 probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita maxima]3.1e-2976.47Show/hide
Query:  PSHSPT----KVASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYY
        P+H+ +    ++AS TLLL  L  SASLIALS+ANFNQD QITW DGRAKI+NNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY
Subjt:  PSHSPT----KVASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYY

Query:  VS
        +S
Subjt:  VS

XP_038878721.1 probable xyloglucan endotransglucosylase/hydrolase protein 23 [Benincasa hispida]5.4e-2984.44Show/hide
Query:  VASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS
        +AS TL L LLFSA L+ALS+ANFNQD QITW DGRA ILNNGQLLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+S
Subjt:  VASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS

TrEMBL top hitse value%identityAlignment
A0A5D3CKM0 Xyloglucan endotransglucosylase/hydrolase4.9e-2884.34Show/hide
Query:  LLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV
        L LL  +ASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  LLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV

A0A6J1E169 Xyloglucan endotransglucosylase/hydrolase5.8e-2982.42Show/hide
Query:  VASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS
        +AS TLLL  L  SASL+ALS+ANFNQD QITW DGRAKI+NNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+S
Subjt:  VASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS

A0A6J1JH63 Xyloglucan endotransglucosylase/hydrolase1.5e-2976.47Show/hide
Query:  PSHSPT----KVASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYY
        P+H+ +    ++AS TLLL  L  SASLIALS+ANFNQD QITW DGRAKI+NNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY
Subjt:  PSHSPT----KVASKTLLL--LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYY

Query:  VS
        +S
Subjt:  VS

Q06BI4 Xyloglucan endotransglucosylase/hydrolase2.9e-2884.52Show/hide
Query:  LLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS
        L LL  +ASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+S
Subjt:  LLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS

Q84JX3 Xyloglucan endotransglucosylase/hydrolase4.0e-3085.56Show/hide
Query:  VASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS
        +AS TL L LLFSASLIA+S+ANFNQD QITW DGRAKILNNG+LLTLSLDKASGSGFQSQNEYL GKIDMQ  LVAGNSAGTVTAYY+S
Subjt:  VASKTLLL-LLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYVS

SwissProt top hitse value%identityAlignment
P24806 Xyloglucan endotransglucosylase/hydrolase protein 242.3e-2261.96Show/hide
Query:  SPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV
        SP K+   T LL+    +  ++SAA+FN D+ + W +GR KILNNGQLLTLSLDK+SGSGFQS+ EYL GKIDMQ  LV GNSAGTVT +Y+
Subjt:  SPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV

Q38857 Xyloglucan endotransglucosylase/hydrolase protein 223.3e-2164.71Show/hide
Query:  TLLLLLFSASLIALS-AANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV
        T LL LF + +I  S +ANF +D++ITW DGR +I NNG+LLTLSLDK+SGSGFQS+NEYL GK+ MQ  LV GNSAGTVT  Y+
Subjt:  TLLLLLFSASLIALS-AANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV

Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 231.4e-2464.77Show/hide
Query:  VASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV
        ++  T+++ L ++ +I   +ANF +D++ITW DGR +I NNG LLTLSLDKASGSGFQS+NEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  VASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV

Q9FKL8 Putative xyloglucan endotransglucosylase/hydrolase protein 134.3e-2164.37Show/hide
Query:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYVS
        +K  LLLL    LI+LSA +F  +  ITW +GRA I+ +GQLLT +LDK SGSGFQS+ EYL GKID  M+LVAGNSAGTVTAYY+S
Subjt:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYVS

Q9ZSU4 Xyloglucan endotransglucosylase/hydrolase protein 143.3e-2165.06Show/hide
Query:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYVS
        LLL     ++A SA NF +   ITW +GRA I  NGQLLT +LDK SGSGFQS+ EYL GKIDM  +LVAGNSAGTVTAYY+S
Subjt:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYVS

Arabidopsis top hitse value%identityAlignment
AT4G25810.1 xyloglucan endotransglycosylase 61.0e-2564.77Show/hide
Query:  VASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV
        ++  T+++ L ++ +I   +ANF +D++ITW DGR +I NNG LLTLSLDKASGSGFQS+NEYL GKIDMQ  LVAGNSAGTVTAYY+
Subjt:  VASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV

AT4G25820.1 xyloglucan endotransglucosylase/hydrolase 142.3e-2265.06Show/hide
Query:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYVS
        LLL     ++A SA NF +   ITW +GRA I  NGQLLT +LDK SGSGFQS+ EYL GKIDM  +LVAGNSAGTVTAYY+S
Subjt:  LLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDM--QLVAGNSAGTVTAYYVS

AT4G30270.1 xyloglucan endotransglucosylase/hydrolase 241.6e-2361.96Show/hide
Query:  SPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV
        SP K+   T LL+    +  ++SAA+FN D+ + W +GR KILNNGQLLTLSLDK+SGSGFQS+ EYL GKIDMQ  LV GNSAGTVT +Y+
Subjt:  SPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV

AT5G57540.1 xyloglucan endotransglucosylase/hydrolase 133.0e-2264.37Show/hide
Query:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYVS
        +K  LLLL    LI+LSA +F  +  ITW +GRA I+ +GQLLT +LDK SGSGFQS+ EYL GKID  M+LVAGNSAGTVTAYY+S
Subjt:  SKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKID--MQLVAGNSAGTVTAYYVS

AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein2.3e-2264.71Show/hide
Query:  TLLLLLFSASLIALS-AANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV
        T LL LF + +I  S +ANF +D++ITW DGR +I NNG+LLTLSLDK+SGSGFQS+NEYL GK+ MQ  LV GNSAGTVT  Y+
Subjt:  TLLLLLFSASLIALS-AANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQ--LVAGNSAGTVTAYYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTCTCGGAATCCCATTGTCACTCATTCATTCATTTCCCTCACACTCACCAACAAAAGTGGCTTCCAAAACTCTTCTCCTTCTCCTTTTCTCCGCCTCTCTAAT
TGCTCTCTCTGCAGCTAACTTCAACCAGGATATTCAAATCACTTGGAGAGATGGTCGAGCCAAAATTCTCAACAACGGCCAACTTCTCACTCTGTCTCTCGACAAGGCCT
CAGGCTCCGGATTCCAATCCCAGAACGAGTACTTGCTTGGAAAGATTGACATGCAACTTGTTGCTGGCAATTCCGCTGGCACTGTCACTGCCTATTATGTAAGTCTGCTT
GTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTCTCGGAATCCCATTGTCACTCATTCATTCATTTCCCTCACACTCACCAACAAAAGTGGCTTCCAAAACTCTTCTCCTTCTCCTTTTCTCCGCCTCTCTAAT
TGCTCTCTCTGCAGCTAACTTCAACCAGGATATTCAAATCACTTGGAGAGATGGTCGAGCCAAAATTCTCAACAACGGCCAACTTCTCACTCTGTCTCTCGACAAGGCCT
CAGGCTCCGGATTCCAATCCCAGAACGAGTACTTGCTTGGAAAGATTGACATGCAACTTGTTGCTGGCAATTCCGCTGGCACTGTCACTGCCTATTATGTAAGTCTGCTT
GTTTAA
Protein sequenceShow/hide protein sequence
MEFLGIPLSLIHSFPSHSPTKVASKTLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYLLGKIDMQLVAGNSAGTVTAYYVSLL
V