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Carg09019 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09019
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 2-like
Genome locationCarg_Chr11:2023553..2023993
RNA-Seq ExpressionCarg09019
SyntenyCarg09019
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587760.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.0e-7597.33Show/hide
Query:  MEFKHHQLNLGLFLEP----SSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWK
        MEFKHHQLNLGLFLEP    SSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWK
Subjt:  MEFKHHQLNLGLFLEP----SSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWK

Query:  VETITAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
        VETITAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
Subjt:  VETITAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL

KAG7021730.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-77100Show/hide
Query:  MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETI
        MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETI
Subjt:  MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETI

Query:  TAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
        TAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
Subjt:  TAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL

XP_022987492.1 zinc finger protein 7-like [Cucurbita maxima]7.8e-4470.59Show/hide
Query:  MEFKHH-QLNLGLFLEPSSSSSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHET-NITMNSTHLWKV
        MEFKHH QLNL L LEPSS SS       SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+RAYRGDHE+ N+ M S+HLWKV
Subjt:  MEFKHH-QLNLGLFLEPSSSSSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHET-NITMNSTHLWKV

Query:  ETITAAAPLVIGPHGVDGGR-EIRGFAAENH---HLHHHHQDDIGHLDLSLRL
        ET+TA  PLVI     DGGR +IR F A+ +   HLHHH  DDIGHLDLSLRL
Subjt:  ETITAAAPLVIGPHGVDGGR-EIRGFAAENH---HLHHHHQDDIGHLDLSLRL

XP_023003862.1 zinc finger protein 2-like [Cucurbita maxima]1.1e-7194.63Show/hide
Query:  MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETI
        MEFKHHQLNLGLFLEP    SSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKK+REIRAYRGDHETNITMNSTHLWKVETI
Subjt:  MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETI

Query:  TAAAPLVIGPHGVDGGREIRGFAAENH---HLHHHHQDDIGHLDLSLRL
        TAAAPLVIGPHGVDGGREIRGFAAENH   HLHHHHQDDIGHLDLSLRL
Subjt:  TAAAPLVIGPHGVDGGREIRGFAAENH---HLHHHHQDDIGHLDLSLRL

XP_023531503.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo]2.1e-7393.55Show/hide
Query:  MEFKHHQLNLGLFLEP---------SSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNS
        MEFKHHQLNLGLFLEP         SSSSSSSSSSSYSA VSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNS
Subjt:  MEFKHHQLNLGLFLEP---------SSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNS

Query:  THLWKVETITAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
        THLWKVETITAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
Subjt:  THLWKVETITAAAPLVIGPHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL

TrEMBL top hitse value%identityAlignment
A0A4D6KUJ9 C2H2-type domain-containing protein2.9e-2049.06Show/hide
Query:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRE----IRAYRGDHETNITMNSTHLWKV----
        + LNL L LEPSSSSSSS S     P+SP  E R++ CNYCQRKFYSSQALGGHQNAHKLERTLAKKSRE    +++Y    + +    S HL +     
Subjt:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRE----IRAYRGDHETNITMNSTHLWKV----

Query:  ---------ETITAAAPLVIGPH-GVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
                   +        GP+ GV  G   RG+A+E      H Q+DIG LDLSLRL
Subjt:  ---------ETITAAAPLVIGPH-GVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL

A0A6J1BYT1 protein LATE FLOWERING8.7e-2555.35Show/hide
Query:  MEFKHHQLNLGLFLEPSSSSSSSSSS----SYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIR--AYRGDHETNITM-----
        MEFKH QLNL L LEPSS S SSSS+      S P     + RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKKSREIR  AY GD   N+ M     
Subjt:  MEFKHHQLNLGLFLEPSSSSSSSSSS----SYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIR--AYRGDHETNITM-----

Query:  NSTHLWKVETITAAAPLVIG--PHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL
        NS HLWK+ET     P VIG  P    GG +    A+   H     + +   LDLSLRL
Subjt:  NSTHLWKVETITAAAPLVIG--PHGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL

A0A6J1E5I0 zinc finger protein 71.9e-4371.24Show/hide
Query:  MEFKHH-QLNLGLFLEPSSSSSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHET-NITMNSTHLWKV
        MEFKHH QLNL L LEPSS SS       SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+RAYRGDHE+ N+ M S+HLWKV
Subjt:  MEFKHH-QLNLGLFLEPSSSSSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHET-NITMNSTHLWKV

Query:  ETITAAAPLVIGPHGVDGGR-EIRGFAAENH--HLHHHHQ-DDIGHLDLSLRL
        ET+TA +PLVI     DGGR +IR F A+ +   LHHHHQ DDIGHLDLSLRL
Subjt:  ETITAAAPLVIGPHGVDGGR-EIRGFAAENH--HLHHHHQ-DDIGHLDLSLRL

A0A6J1JAI3 zinc finger protein 7-like3.8e-4470.59Show/hide
Query:  MEFKHH-QLNLGLFLEPSSSSSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHET-NITMNSTHLWKV
        MEFKHH QLNL L LEPSS SS       SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+RAYRGDHE+ N+ M S+HLWKV
Subjt:  MEFKHH-QLNLGLFLEPSSSSSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHET-NITMNSTHLWKV

Query:  ETITAAAPLVIGPHGVDGGR-EIRGFAAENH---HLHHHHQDDIGHLDLSLRL
        ET+TA  PLVI     DGGR +IR F A+ +   HLHHH  DDIGHLDLSLRL
Subjt:  ETITAAAPLVIGPHGVDGGR-EIRGFAAENH---HLHHHHQDDIGHLDLSLRL

A0A6J1KNT5 zinc finger protein 2-like5.6e-7294.63Show/hide
Query:  MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETI
        MEFKHHQLNLGLFLEP    SSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKK+REIRAYRGDHETNITMNSTHLWKVETI
Subjt:  MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETI

Query:  TAAAPLVIGPHGVDGGREIRGFAAENH---HLHHHHQDDIGHLDLSLRL
        TAAAPLVIGPHGVDGGREIRGFAAENH   HLHHHHQDDIGHLDLSLRL
Subjt:  TAAAPLVIGPHGVDGGREIRGFAAENH---HLHHHHQDDIGHLDLSLRL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 21.5e-2178.67Show/hide
Query:  FKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQ-RVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREI
        +K+HQLNL L LEPSS SSSSSSS+ S   S C EQ RV+ CNYCQRKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  FKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQ-RVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREI

Q39262 Zinc finger protein 36.9e-1150.68Show/hide
Query:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRA
        H+LNL   ++ ++S  + S++S        +EQ+++ CNYCQR FYSSQALGGHQNAHK ERTLAK+ + + A
Subjt:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRA

Q39263 Zinc finger protein 46.2e-1263.79Show/hide
Query:  PSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKS
        P SS+S SS+        P   +RV+ CNYCQRKFYSSQALGGHQNAHK ERTLAK++
Subjt:  PSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKS

Q39266 Zinc finger protein 73.4e-1042.7Show/hide
Query:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHL
        + ++L L L  + +  + S+   + P       RV+ CNYC+RKFYSSQALGGHQNAHK ERT+AK++  +    G H    T  S+ L
Subjt:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHL

Q42485 Zinc finger protein 12.4e-1160.32Show/hide
Query:  LFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR
        L L  S  +SSSS+S +       ++ RV+ CNYCQRKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  LFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR

Arabidopsis top hitse value%identityAlignment
AT1G66140.1 zinc finger protein 44.4e-1363.79Show/hide
Query:  PSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKS
        P SS+S SS+        P   +RV+ CNYCQRKFYSSQALGGHQNAHK ERTLAK++
Subjt:  PSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKS

AT1G80730.1 zinc-finger protein 11.7e-1260.32Show/hide
Query:  LFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR
        L L  S  +SSSS+S +       ++ RV+ CNYCQRKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  LFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR

AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-1168.18Show/hide
Query:  SPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREI
        S  +EQ+++ CNYCQR FYSSQALGGHQNAHK ERTLAK+ + +
Subjt:  SPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREI

AT5G25160.1 zinc finger protein 34.9e-1250.68Show/hide
Query:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRA
        H+LNL   ++ ++S  + S++S        +EQ+++ CNYCQR FYSSQALGGHQNAHK ERTLAK+ + + A
Subjt:  HQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRA

AT5G57520.1 zinc finger protein 21.0e-2278.67Show/hide
Query:  FKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQ-RVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREI
        +K+HQLNL L LEPSS SSSSSSS+ S   S C EQ RV+ CNYCQRKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  FKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQ-RVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTAAACACCATCAGCTCAACCTTGGCCTTTTTCTAGAACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTACTCGGCTCCTGTGAGTCCATGTAGCGA
GCAGAGGGTTTACCCATGCAACTATTGCCAGAGGAAGTTTTATAGCTCACAGGCTTTGGGAGGCCACCAAAATGCTCATAAGCTGGAGAGGACTTTGGCGAAGAAGAGCA
GAGAGATAAGGGCATACCGAGGAGATCATGAAACCAATATTACGATGAATTCAACCCATTTGTGGAAAGTTGAGACAATCACAGCTGCAGCACCTTTAGTAATTGGCCCA
CATGGGGTTGATGGTGGGAGAGAGATAAGGGGTTTCGCAGCTGAAAATCATCATCTTCATCATCATCATCAAGATGATATTGGCCATCTTGATTTGTCTTTAAGGCTCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTAAACACCATCAGCTCAACCTTGGCCTTTTTCTAGAACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTACTCGGCTCCTGTGAGTCCATGTAGCGA
GCAGAGGGTTTACCCATGCAACTATTGCCAGAGGAAGTTTTATAGCTCACAGGCTTTGGGAGGCCACCAAAATGCTCATAAGCTGGAGAGGACTTTGGCGAAGAAGAGCA
GAGAGATAAGGGCATACCGAGGAGATCATGAAACCAATATTACGATGAATTCAACCCATTTGTGGAAAGTTGAGACAATCACAGCTGCAGCACCTTTAGTAATTGGCCCA
CATGGGGTTGATGGTGGGAGAGAGATAAGGGGTTTCGCAGCTGAAAATCATCATCTTCATCATCATCATCAAGATGATATTGGCCATCTTGATTTGTCTTTAAGGCTCTG
A
Protein sequenceShow/hide protein sequence
MEFKHHQLNLGLFLEPSSSSSSSSSSSYSAPVSPCSEQRVYPCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREIRAYRGDHETNITMNSTHLWKVETITAAAPLVIGP
HGVDGGREIRGFAAENHHLHHHHQDDIGHLDLSLRL