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Carg09034 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09034
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmyb-related transcription factor, partner of profilin-like
Genome locationCarg_Chr11:1943545..1946238
RNA-Seq ExpressionCarg09034
SyntenyCarg09034
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058264.1 uncharacterized protein E6C27_scaffold274G005900 [Cucumis melo var. makuwa]6.3e-3455.09Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQN-------------
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQPVFESPKKVIQPPPVQPPP QFDKSVS+    NGNASV+GFFRNAVSKVQN             
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQN-------------

Query:  ----------------------------------------------GKWGHESEGTVEQSPERVTGA
                                                      G WGHES+GTVEQS ERVTG+
Subjt:  ----------------------------------------------GKWGHESEGTVEQSPERVTGA

KAG6587745.1 hypothetical protein SDJN03_16310, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3873.81Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
        MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQN      +  +++ 
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ

Query:  SPERVTGAKHEKLLKSLGDSYQNTNL
           R  G    K   +L D Y++  +
Subjt:  SPERVTGAKHEKLLKSLGDSYQNTNL

KAG7021716.1 hypothetical protein SDJN02_15443, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-62100Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
        MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ

Query:  SPERVTGAKHEKLLKSLGDSYQNTNL
        SPERVTGAKHEKLLKSLGDSYQNTNL
Subjt:  SPERVTGAKHEKLLKSLGDSYQNTNL

XP_022930193.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata]1.6e-3772.22Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
        MPINTESTPPPLIGKIGPYTVFMTPPSTPS ASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDT ANGNASVAGFFRNAVSKVQN      +  +++ 
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ

Query:  SPERVTGAKHEKLLKSLGDSYQNTNL
           R  G    K   +L D Y++  +
Subjt:  SPERVTGAKHEKLLKSLGDSYQNTNL

XP_023530480.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo]2.5e-3569.84Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
        MPINTESTPPPLIGKIGPYTVFMTPPSTPS ASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSV    NGNASVAGFFRNAVSKVQN      +  +++ 
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ

Query:  SPERVTGAKHEKLLKSLGDSYQNTNL
           R  G    K   +L D Y++  +
Subjt:  SPERVTGAKHEKLLKSLGDSYQNTNL

TrEMBL top hitse value%identityAlignment
A0A1S3BXF0 uncharacterized protein LOC1034942568.3e-3264.29Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQPVFESPKKVIQPPPVQPPP QFDKSVS+    NGNASV+GFFRNAVSKVQN      +   ++ 
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ

Query:  SPERVTGAKHEKLLKSLGDSYQNTNL
           R  G    K   +L D Y++  +
Subjt:  SPERVTGAKHEKLLKSLGDSYQNTNL

A0A5A7USX1 Uncharacterized protein3.0e-3455.09Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQN-------------
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQPVFESPKKVIQPPPVQPPP QFDKSVS+    NGNASV+GFFRNAVSKVQN             
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQN-------------

Query:  ----------------------------------------------GKWGHESEGTVEQSPERVTGA
                                                      G WGHES+GTVEQS ERVTG+
Subjt:  ----------------------------------------------GKWGHESEGTVEQSPERVTGA

A0A5D3CIQ6 Wiskott-Aldrich syndrome protein family member 22.8e-3249.73Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQN-------------
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQPVFESPKKVIQPPPVQPPP QFDKSVS+    NGNASV+GFFRNAVSKVQN             
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQN-------------

Query:  --------------------------------------------------------------GKWGHESEGTVEQSPERVTGA
                                                                      G WGHES+GTVEQS ER+TG+
Subjt:  --------------------------------------------------------------GKWGHESEGTVEQSPERVTGA

A0A6J1EQV9 myb-related transcription factor, partner of profilin-like7.7e-3872.22Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
        MPINTESTPPPLIGKIGPYTVFMTPPSTPS ASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDT ANGNASVAGFFRNAVSKVQN      +  +++ 
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ

Query:  SPERVTGAKHEKLLKSLGDSYQNTNL
           R  G    K   +L D Y++  +
Subjt:  SPERVTGAKHEKLLKSLGDSYQNTNL

A0A6J1KZL1 myb-related transcription factor, partner of profilin-like7.7e-3872.22Show/hide
Query:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ
        MPINTESTPPPLIGKIGPYTVFMTPPSTPS ASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDT ANGNASVAGFFRNAVSKVQN      +  +++ 
Subjt:  MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQ

Query:  SPERVTGAKHEKLLKSLGDSYQNTNL
           R  G    K   +L D Y++  +
Subjt:  SPERVTGAKHEKLLKSLGDSYQNTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G18910.1 hydroxyproline-rich glycoprotein family protein7.4e-1746.77Show/hide
Query:  MPINTE-STPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVE
        MPIN + STPPP+IGKIGPYTVFMTPP+TP     P  V + P   +  PPV PPPQQF KSV+   +++ + SV GFF+NAV+KVQN      +  +V+
Subjt:  MPINTE-STPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVE

Query:  QSPERVTGAKHEKLLKSLGDSYQN
            R  G    K   +L + Y++
Subjt:  QSPERVTGAKHEKLLKSLGDSYQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCC
GGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCG
TCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACAT
GAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCC
GGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCG
TCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACAT
GAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG
Protein sequenceShow/hide protein sequence
MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKH
EKLLKSLGDSYQNTNL