; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09048 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09048
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCadherin-4 like
Genome locationCarg_Chr11:1859183..1861575
RNA-Seq ExpressionCarg09048
SyntenyCarg09048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587735.1 hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia]6.6e-93100Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

XP_022932487.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata]3.3e-9299.45Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFISAKLQSAP KLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

XP_022974211.1 uncharacterized protein LOC111472830 isoform X1 [Cucurbita maxima]1.9e-9299.45Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVD ELETSNELELEIEVKTPTSTDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

XP_023531265.1 uncharacterized protein LOC111793559 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-9198.9Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSF ADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGA RLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

XP_038880607.1 uncharacterized protein LOC120072253 [Benincasa hispida]2.0e-8692.27Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFIS+K QSAPLKLSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSF ADSEVLAIRKLDDFVQ+IIVERSTP+WLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCLDFFAKES SGATRL PVD+ELETSNE+ELEIEVKTPTSTDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

TrEMBL top hitse value%identityAlignment
A0A6J1C135 uncharacterized protein LOC1110073002.5e-8286.19Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD+ELET+NE+ELEI+VK P STDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

A0A6J1E5F5 uncharacterized protein LOC1114301021.9e-8288.4Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILS SQSFIS+K+QSAPLKL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFAK SISGATRL PVD+E + SNE+ELEIEVKT T TDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X11.6e-9299.45Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFISAKLQSAP KLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X19.2e-9399.45Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVD ELETSNELELEIEVKTPTSTDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

A0A6J1JIU5 uncharacterized protein LOC1114848407.3e-8287.85Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILS SQSFIS+KLQSAPLK+ LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFA+ SISGATRL PVD+E +TSNE+E EIEVKT T TDNSNQPED
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein2.3e-1940.97Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-
        MAR  S S S    +  +A    S L+PSS ++  R++S+ R G +   EID  ++S      +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP 
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKES
           ++   +  L  KL  PLT EES S  ++ GWP  D+F K S
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKES

AT1G16840.3 unknown protein4.3e-1835.87Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-
        MAR  S S S    +  +A    S L+PSS ++  R++S+ R G +   EID  ++S      +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP 
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
           ++   +  L  KL  PLT EES S  ++ GWP  D+F K           V  +L         +E KT T++++ +  ED
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

AT1G16840.4 unknown protein4.3e-1835.87Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-
        MAR  S S S    +  +A    S L+PSS ++  R++S+ R G +   EID  ++S      +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP 
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED
           ++   +  L  KL  PLT EES S  ++ GWP  D+F K           V  +L         +E KT T++++ +  ED
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED

AT1G78890.1 unknown protein4.5e-2343.06Show/hide
Query:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHR----NRSTRSGKVKFI-EIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFW
        MAR LS S S    +  +A    SLL+PSS  +  R    NR + S  +  I EID+ +           + KL+D V +I+V RS PDWLPFVPG+SFW
Subjt:  MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHR----NRSTRSGKVKFI-EIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFW

Query:  VPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAK
        VPP R++   +  L +KL  P++ EES S+++ RGWPC D+F K
Subjt:  VPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAK

AT2G19180.1 unknown protein9.0e-2443.9Show/hide
Query:  IEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATR
        IE++++S +   ++E   ++KL++FV++IIV  STPDWLPF PGSSFWVPP +    K+ +L DK+  PLT+EES SL++  GWPC  FF          
Subjt:  IEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKESISGATR

Query:  LVPVDSELETSNELELEIEVKTP
        + P D    T  E E  +E+K P
Subjt:  LVPVDSELETSNELELEIEVKTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGAATTCTATCTTTATCGCAATCTTTCATCTCCGCCAAGTTGCAATCTGCGCCTTTGAAATTATCGCTGTTGATTCCGTCTTCCTTTGTCCTCGGTCATCGGAA
CCGATCTACACGTTCCGGCAAGGTCAAGTTTATCGAAATTGACCTCGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGACTTTGTAC
AGAAGATTATCGTTGAGCGATCGACTCCGGATTGGCTTCCGTTTGTTCCCGGTTCCTCATTTTGGGTTCCTCCTCGCCGTAACAAACCACGCAAGGTGGTCGACCTGTTC
GATAAATTGGTTGAACCGCTCACCAAAGAGGAGTCTCCTTCACTCGCTAACGCCCGTGGTTGGCCCTGCTTGGATTTCTTCGCCAAAGAGTCCATCTCTGGAGCAACTCG
ATTAGTTCCGGTAGACAGTGAATTGGAAACTTCAAATGAGTTGGAGTTAGAGATTGAGGTGAAGACGCCAACAAGTACAGATAACTCAAACCAGCCCGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
CACCCAGAGCTTAAAGGTGAGGGAGCTCCTCTTCAATTTATAGCGTTCAAATTTCATCTGGTTTCTTCGCATGGCCCGAATTCTATCTTTATCGCAATCTTTCATCTCCG
CCAAGTTGCAATCTGCGCCTTTGAAATTATCGCTGTTGATTCCGTCTTCCTTTGTCCTCGGTCATCGGAACCGATCTACACGTTCCGGCAAGGTCAAGTTTATCGAAATT
GACCTCGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGACTTTGTACAGAAGATTATCGTTGAGCGATCGACTCCGGATTGGCTTCC
GTTTGTTCCCGGTTCCTCATTTTGGGTTCCTCCTCGCCGTAACAAACCACGCAAGGTGGTCGACCTGTTCGATAAATTGGTTGAACCGCTCACCAAAGAGGAGTCTCCTT
CACTCGCTAACGCCCGTGGTTGGCCCTGCTTGGATTTCTTCGCCAAAGAGTCCATCTCTGGAGCAACTCGATTAGTTCCGGTAGACAGTGAATTGGAAACTTCAAATGAG
TTGGAGTTAGAGATTGAGGTGAAGACGCCAACAAGTACAGATAACTCAAACCAGCCCGAGGATTGA
Protein sequenceShow/hide protein sequence
MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLF
DKLVEPLTKEESPSLANARGWPCLDFFAKESISGATRLVPVDSELETSNELELEIEVKTPTSTDNSNQPED