CuGenDBv2

Gene ID	Carg09060
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nucleolar and coiled-body phosphoprotein 1 isoform X1
Genome location	Carg_Chr11:1786118..1789521
RNA-Seq Expression	Carg09060
Synteny	Carg09060
Gene Ontology terms	GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR006594 - LIS1 homology motif

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6587726.1 60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-179

99.43

Show/hide

Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIATPNKP DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

KAG7021691.1 hypothetical protein SDJN02_15417 [Cucurbita argyrosperma subsp. argyrosperma]

8.1e-191

100

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Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVGFAILLASCRNAACFQ
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVGFAILLASCRNAACFQ
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVGFAILLASCRNAACFQ

XP_022931348.1 nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita moschata]

1.3e-180

99.43

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Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENA TLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

XP_022931357.1 nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita moschata]

9.3e-179

99.15

Show/hide

Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIATPNKP DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENA TLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

XP_023530907.1 nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo]

3.1e-174

96.88

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Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIATPNKPVDEETVKEG DDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKEN AT+EENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSE TLNES GIKTPHEEEHNDKSKKRKRLASEDLDS TVDQNETEDIKRRKLEGS+GCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        TAEKTSSKKALKKHSNGSAEPKT NAFQRVKVDAVTFSD+KLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C1H7 nucleolar and coiled-body phosphoprotein 1 isoform X1

2.3e-114

64.23

Show/hide

Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        M++TLTTSVSPSLLA KPRQVLLS+    +    E P S  + VSL+PEQRTLLLHAV+ +L RNGFSK+LKKFRSEAQIEKD SKD  +SLEEMCH +L
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDS-------------------VQEEARKKSKDKKKKKNK
        KKC+QAI T NK V+ ETVKE  DD  PEAQEEP KKSK+KK  K  V ETH D  E EKS+S                   V EEA KKSKDKKKKKNK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDS-------------------VQEEARKKSKDKKKKKNK

Query:  E---------------------------NAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSC
        E                           NA TLEE V KSK KKKKDG+ L DENSNQLMT   EGT+N++ GIKT HE+E+ND SKKRKRLASED DS 
Subjt:  E---------------------------NAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSC

Query:  TVDQNETEDIKRRKLEGSKGCNDGVQSTKVN-------------TSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEK
        TVD+  TED+KRRKLEGSKGCN+GVQSTKVN             TSNELSQQT E VEKTAE+TS+KKA+KKHSNGS EPKTINAFQRVKVDAVTF+DEK
Subjt:  TVDQNETEDIKRRKLEGSKGCNDGVQSTKVN-------------TSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEK

Query:  LADNSYWAKVG
        LADNSYWAK G
Subjt:  LADNSYWAKVG

A0A6J1ETE6 nucleolar and coiled-body phosphoprotein 1 isoform X2

4.5e-179

99.15

Show/hide

Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIATPNKP DEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENA TLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

A0A6J1EYA7 nucleolar and coiled-body phosphoprotein 1 isoform X1

6.3e-181

99.43

Show/hide

Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENA TLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

A0A6J1IB66 nucleolar and coiled-body phosphoprotein 1 isoform X2

2.7e-163

93.47

Show/hide

Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSLFL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIAT NK  DEETVKEG  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKNKEN ATLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        D RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKSKKRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        T+EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

A0A6J1IDS9 nucleolar and coiled-body phosphoprotein 1 isoform X1

3.7e-165

93.75

Show/hide

Query:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
        MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSLFL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL
Subjt:  MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHL

Query:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK
        KKCTQAIAT NK VDEETVKEG  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKNKEN ATLEENVVKSKKKKKK
Subjt:  KKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKK

Query:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
        D RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKSKKRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEK
Subjt:  DGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK

Query:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG
        T+EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Subjt:  TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink).

4.1e-15

33.54

Show/hide

Query:  KAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLS---LEEMCHMHLKKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKS
        K  +L+ EQ+ LLL +V+ +L R GFSK  KK  SEA+IEK   K+L+ S   LEE+    L K            D E    G  +       E  KK 
Subjt:  KAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLS---LEEMCHMHLKKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKS

Query:  KDKKKIKKAVAETHVDIAENEK---SDSVQEEARKKSKDKK--------KKKNKENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIG
        K KKK K    ET V++ E EK   +D+V E+  K+ K KK        ++K KE  A +E+ V + KKKK K   + +D++  ++              
Subjt:  KDKKKIKKAVAETHVDIAENEK---SDSVQEEARKKSKDKK--------KKKNKENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIG

Query:  IKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAF
                    SKKRKR   E+    T D +E E  +R+K E     ++GVQ T V    E   + N   EK+  K++++K+ K  SN S EPK    F
Subjt:  IKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAF

Query:  QRVKVDAVTFSDEKLADNSYWAKVGFAI
        QRV VD + +++     NSY++K G  I
Subjt:  QRVKVDAVTFSDEKLADNSYWAKVGFAI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCC
CATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGT
TTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCTACACCA
AACAAACCAGTAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGC
AGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATG
CTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGA
ACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGA
TCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGA
CGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTG
AAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGTGGGATTTGCTATATTATTGGCTTCTTGCCGCAATGCAGCTTGCTTTCA
GTAG

mRNA sequence

Show/hide mRNA sequence

AATGAGACGAGCGTATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAAC
GACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAA
AACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAG
CCATTGCTACACCAAACAAACCAGTAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAG
AAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAA
AAACAAAGAGAATGCTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTA
GATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGAC
AGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGA
GCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGCCAAAGACCATTAATG
CATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGTGGGATTTGCTATATTATTGGCTTCTTGCCGCAAT
GCAGCTTGCTTTCAGTAGGATCTTTTGTTTCTCATTTCTAATCTATCATATTGGGCAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGG
TTAAAGGAAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGAT
GATTGATCATCATATTAATGGATTCAGATTATGGTTCTTCACCTCTTTTTATCAATCATGAAGGAGGGAAGTTTCCATTTAATGAAAAAAATAGTTGTATGTTGCATAGA
AATTGGAAAGGATTGATTGATGTTCTATAGAACATTATTTTTTGGAAGGAATCCACTCAAAAGTTGGGCTACTGCCTTCACCGATCCTGAACTTAATATTCTATTGTGTA
GGTCTCC

Protein sequence

Show/hide protein sequence

MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATP
NKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEG
TLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRV
KVDAVTFSDEKLADNSYWAKVGFAILLASCRNAACFQ

Carg09060 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome