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Carg09067 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09067
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein 230
Genome locationCarg_Chr11:1752278..1753253
RNA-Seq ExpressionCarg09067
SyntenyCarg09067
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]5.1e-50100Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]1.4e-4795.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]4.8e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022931504.1 transmembrane protein 230-like [Cucurbita moschata]6.7e-5099.03Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGI+VGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]1.3e-4898.06Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIVVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2306.7e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2302.3e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1EUE9 Transmembrane protein 2303.2e-5099.03Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGI+VGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2303.2e-5099.03Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGI+VGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2303.3e-4795.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLL FGMIGIVVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2304.1e-1046.75Show/hide
Query:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L   G   I++G  + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2302.4e-1046.75Show/hide
Query:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L   G   I++G  + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2304.1e-1046.75Show/hide
Query:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV L   G   I++G  + +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2304.1e-1046.75Show/hide
Query:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L   G   I++G  + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2304.1e-1046.75Show/hide
Query:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L   G   I++G  + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLFFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)1.1e-4277.67Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+M+ + +TV+NRPP+KEI+LAV LL FG +GIV+G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)1.5e-1245.45Show/hide
Query:  NRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        +R P K IALAV LLF G + +++  F+    + GD + G    +LG L F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  NRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)2.4e-4582.52Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIM+++ +TVNNRPP+KEIALAV+LL FG +GIV G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGTGGACCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGGCCTCCTATCAAGGAGATCGCTCTTGCTGTTTC
TCTTCTCTTTTTTGGAATGATTGGAATCGTCGTTGGTATCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCT
TGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCGTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCGCCTGTCTAA
mRNA sequenceShow/hide mRNA sequence
GCCTTTCTTTTCACTCCACCTCCTCGCGAGTCAAAAAAACAGGTAGGTGTCTCTTTGCTTCAAAAAACAAAATTCCACCGTCGTCGCCGCCGATTTCTCTACCAAATCCC
GGCACCTATTTTTCTGCGGATCCAAGCTTCAACACCTTCTTCTTCCTTCAACCCTAGATCTCCGTTTATTACAGAGAAAGATGGCGTACGTGGACCATGCGTTTTCGATA
ACAGACGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGGCCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCTTTTTTGGAATGATTGGAATCGT
CGTTGGTATCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGA
TTGCTTACTATGCGTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCGCCTGTCTAAATCCTCCAAGTCCAACCACTTCTCTACACTTGTACATATTTTCTTCTC
CAGATTTCTTCACTCTCTACGCTGTTCCCCCTCCCGCTTCTCCTTTGACTACAACTAACACTATCCGTTTACTATCGATGAAGTGTGAAGGATTGTATGTGAATTTGAGT
TGTGCATTATCGACATAGTTATTCTTCTTCAAGCTTTACTTCCTAGTGGTCGTTCCTACAAGCGTTTCAATATACATGGTGAATTTCAGAGTATAATCGAGTCTTTTATC
TATATAATCTTAAGTTTCATTACTTTCTTGCTCTAGTTTGATTGTTGATTTGAACAAATTCGAGTCTATCATGTGAAAAAAAAATAAAGATTTAAATTTATCTAGCCAGA
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV