CuGenDBv2

Gene ID	Carg09077
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Genome location	Carg_Chr11:1705608..1706231
RNA-Seq Expression	Carg09077
Synteny	Carg09077
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR006137 - NADH:ubiquinone oxidoreductase-like, 20kDa subunit

Homology

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GenBank top hits

e value

%identity

Alignment

AWI73135.1 NADH dehydrogenase 32 kDa subunit [Craspidospermum verticillatum]

4.1e-26

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAVMDAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

KAG7021675.1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.8e-51

100

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Query:  MVLNVNAGENCLSLQDSQNVSLEILCGDRSKYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        MVLNVNAGENCLSLQDSQNVSLEILCGDRSKYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
Subjt:  MVLNVNAGENCLSLQDSQNVSLEILCGDRSKYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

Query:  ALGVAN
        ALGVAN
Subjt:  ALGVAN

YP_009160806.1 NADH-plastoquinone oxidoreductase subunit K [Haloxylon ammodendron]

5.3e-26

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRIKSQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

YP_009557471.1 NADH-plastoquinone oxidoreductase subunit K [Lophiocarpus tenuissimus]

4.1e-26

90.14

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQA
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRIKSQ+
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQA

YP_009922839.1 NADH-plastoquinone oxidoreductase subunit K [Pergularia tomentosa]

4.1e-26

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAVMDAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

TrEMBL top hits

e value

%identity

Alignment

A0A218KG48 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.6e-26

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRIKSQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

A0A2S1P331 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.0e-26

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAVMDAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

A0A2S1UDU7 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.0e-26

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAVMDAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

A0A411K4P8 NADH-quinone oxidoreductase subunit B

2.0e-26

90.14

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQA
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRIKSQ+
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQA

A0A7G6KG04 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.0e-26

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAVMDAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

SwissProt top hits

e value

%identity

Alignment

A0ZZ39 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

1.5e-28

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

B1A939 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

1.5e-28

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

Q2L909 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

1.5e-28

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRI+SQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

Q4VZH1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

6.9e-29

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRIKSQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

Q9M3M0 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

6.9e-29

91.43

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKISREIYEDRIKSQ
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial

1.1e-10

46.67

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISR
        ++VI+MG+C   G  +   SYS VRG D+++ VD+Y+PGCPP  EA++  + +L+KKI+R
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISR

ATCG00430.1 photosystem II reaction center protein G

2.7e-28

85.71

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Query:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ
        KYVIAMGACT TG MFST+SYSTVRGVDKLI VDVYLPGCPPK EAV+DAITKLRKKI+REIY+DRI+ Q
Subjt:  KYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQ

Sequences

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CDS sequence

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ATGGTTCTGAATGTGAATGCTGGTGAGAATTGTCTTTCCCTGCAAGATAGTCAGAATGTTTCTCTTGAGATACTGTGTGGAGATAGATCAAAATATGTTATTGCTATGGG
AGCATGTACAACTACAGGAAGGATGTTTAGTACCAATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATCCTTGTCGATGTGTACTTGCCGGGTTGTCCACCTAAAC
TCGAGGCTGTTATGGATGCAATAACAAAACTTCGTAAAAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGCACTAGGGGTCGCCAACTAA

mRNA sequence

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Protein sequence

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MVLNVNAGENCLSLQDSQNVSLEILCGDRSKYVIAMGACTTTGRMFSTNSYSTVRGVDKLILVDVYLPGCPPKLEAVMDAITKLRKKISREIYEDRIKSQALGVAN

Carg09077 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome