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Carg09149 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09149
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationCarg_Chr11:1352281..1353230
RNA-Seq ExpressionCarg09149
SyntenyCarg09149
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058058.1 ATP-dependent helicase/nuclease subunit A isoform 1 [Cucumis melo var. makuwa]7.5e-2084.13Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKE++KE+EDS+
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
KAG7021603.1 hypothetical protein SDJN02_15329 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-24100Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
KGN63809.2 hypothetical protein Csa_013239 [Cucumis sativus]2.3e-2187.3Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        M+G+SRKWAYIRIITGT+VGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKEQ+KE+EDS+
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
XP_004138234.1 uncharacterized protein LOC101217575 [Cucumis sativus]2.3e-2187.3Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        M+G+SRKWAYIRIITGT+VGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKEQ+KE+EDS+
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
XP_038882309.1 uncharacterized protein LOC120073547 [Benincasa hispida]5.2e-2188.89Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        MIG+SRKWAY+RII GTIVGGVLGFYVMHRVEL YKEKMKERLKQYENELKKKEQ+KE+EDS+
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
TrEMBL top hitse value%identityAlignment
A0A1S3BW37 uncharacterized protein LOC1034941133.6e-2084.13Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKE++KE+EDS+
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 13.6e-2084.13Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+ YKEKMKERLKQYENELKKKE++KE+EDS+
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
A0A6J1BYI4 uncharacterized protein LOC1110068984.7e-2082.54Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
        M+GN RKWAY+RIITGTIVGGVLGFYVMHRVE+ YKEK+KERL+QYE ELKKKEQ+KE+EDS+
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV
A0A6J1E2A1 uncharacterized protein LOC1114301281.5e-1882.26Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDS
        M+G+SR WAY+RII GTIVGGVLGFYVMHRVE+ YKEKMKERL+QYE ELKKKEQ+KE+EDS
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDS
A0A6J1JJ44 uncharacterized protein LOC1114849052.0e-1882.26Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDS
        M+G+SR WAY+RII GTIVGGVLGFYVMHRVE+ YKEKMKERL+QYE ELKKKEQ+KE+EDS
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein8.0e-1255.77Show/hide
Query:  NSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQ
        +S  W Y RII GT++GG LGFYVMHR+E+SYK +M+E L QYE +++K+++
Subjt:  NSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGCAATTCTCGCAAATGGGCTTATATCCGGATCATCACCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTTGAACTGAGCTATAAGGA
GAAAATGAAAGAGAGGTTAAAACAATACGAAAACGAACTGAAGAAGAAGGAGCAAATTAAAGAGGTTGAAGATTCTGTATAA
mRNA sequenceShow/hide mRNA sequence
TTTAATCAATTAAATAATTAGTATTACCGAGTTCATGTGGGCATGTCCACTGCCCGCCGAATCTGGTCAATTCCTAGGAAAGCTGAGAGATCGGGAAAATGATCGGCAAT
TCTCGCAAATGGGCTTATATCCGGATCATCACCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTATGTAATGCACCGCGTTGAACTGAGCTATAAGGAGAAAATGAAAGA
GAGGTTAAAACAATACGAAAACGAACTGAAGAAGAAGGAGCAAATTAAAGAGGTTGAAGATTCTGTATAATAGTGTGAGTGCCCTACAATTTTCACTTCTATCCCCTCCC
GCGGATTGTATACTCTGATTATGCAATACAGAGCCGAAATTGAAGTTCGAGGGTTTTGTGTATCGGTTTTAGAAATTGACCTCATAAAGAACGATCTCTAGTTGTAAATT
GTGACCTAAAACATTCCATTGAAGTGTTTCCCAAGGTAGATGATTTAGGGCACCGTGTATTTAGCAATCAAGTAGTGTAGGCTGGAAAGAAAAGAAATTTGTTGCAGTTT
TGTTTCTGATTTCTACATTTTTCATCGATTAACATTACAGCCCTGTGCTTTTGTTCTGTGATTGATTCATGGTCGGCTTCTTTCAAATTTTGATTCTGAACATTGGCATG
AACTTCAATAGTTGAAGAAGAAACTCCACGCGAATTAGGCGTTCGGTATGGTGGACTATAGAACAACCTGTGTAGATTATAGAACAACCTGTGTAGATGGTGGACTTACA
ATGTTTCATGAACTTCATTTATGAAATGTTAAGCTTGGAAGCGCTGTAATGATGAAGGAATGATATCTTGGGCAAAGAAACAGG
Protein sequenceShow/hide protein sequence
MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELSYKEKMKERLKQYENELKKKEQIKEVEDSV