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Carg09174 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09174
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationCarg_Chr11:1233801..1234579
RNA-Seq ExpressionCarg09174
SyntenyCarg09174
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]3.9e-2464.13Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIF
        DTGPGPY V PP CDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL        YLLLGME P + H+A AL+V LTQVIF
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIF

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]6.0e-1769.35Show/hide
Query:  QNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        Q+   DTGPGPY VAPPMCDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL
Subjt:  QNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]4.9e-43100Show/hide
Query:  MCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIFWVPISM
        MCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIFWVPISM
Subjt:  MCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIFWVPISM

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-56100Show/hide
Query:  MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQV
        MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQV
Subjt:  MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQV

Query:  IFWVPISM
        IFWVPISM
Subjt:  IFWVPISM

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]4.0e-2995.52Show/hide
Query:  MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETK Q V PPRETMSKGDGFCRGL
Subjt:  MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein2.9e-1769.35Show/hide
Query:  QNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        Q+   DTGPGPY VAPPMCDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL
Subjt:  QNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

A0A5A7UV38 Uncharacterized protein1.9e-2464.13Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIF
        DTGPGPY V PP CDPMQHGQ+QPY  I+PPQGETK + V P  +T  +GDGFCRGL        YLLLGME P + H+A AL+V LTQVIF
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIF

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like1.9e-2995.52Show/hide
Query:  MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL
        MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETK Q V PPRETMSKGDGFCRGL
Subjt:  MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAAGTTTACAGAACCAAACTCAAGATACTGGACCAGGTCCTTACCCAGTTGCCCCACCTATGTGTGATCCAATGCAACACGGTCAGTCTCAGCCATACTCTTC
AATTATACCTCCTCAAGGGGAAACCAAGTTTCAAAATGTAGCTCCTCCAAGGGAAACCATGTCTAAAGGTGATGGGTTTTGCAGAGGACTGCTGGTGTTGCTACTGCTGC
CTAGATATCTGCTTCTAGGGATGGAGGATCCTTGCAAATGCCACTTTGCGCCAGCACTTCTAGTTCGTCTGACACAAGTTATCTTCTGGGTTCCCATAAGCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATTTGCAGAAGCTTACAATGCAAAACAACTACTCCACAATCTACCATTTTTTTATGTGCAAAAGTAAACGACTTGAATCTCCACCCTGTTTTATTTCTTGCCTAACTCAA
TTCACATTCAACCTCCAACAGAGACAAAGCATTCAACACCATGAAACAAAGTTTACAGAACCAAACTCAAGATACTGGACCAGGTCCTTACCCAGTTGCCCCACCTATGT
GTGATCCAATGCAACACGGTCAGTCTCAGCCATACTCTTCAATTATACCTCCTCAAGGGGAAACCAAGTTTCAAAATGTAGCTCCTCCAAGGGAAACCATGTCTAAAGGT
GATGGGTTTTGCAGAGGACTGCTGGTGTTGCTACTGCTGCCTAGATATCTGCTTCTAGGGATGGAGGATCCTTGCAAATGCCACTTTGCGCCAGCACTTCTAGTTCGTCT
GACACAAGTTATCTTCTGGGTTCCCATAAGCATGTAG
Protein sequenceShow/hide protein sequence
MKQSLQNQTQDTGPGPYPVAPPMCDPMQHGQSQPYSSIIPPQGETKFQNVAPPRETMSKGDGFCRGLLVLLLLPRYLLLGMEDPCKCHFAPALLVRLTQVIFWVPISM