; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09220 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09220
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionendoplasmic reticulum-Golgi intermediate compartment protein 3-like
Genome locationCarg_Chr05:2509839..2512043
RNA-Seq ExpressionCarg09220
SyntenyCarg09220
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
InterPro domainsIPR012936 - Endoplasmic reticulum vesicle transporter, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020207.1 Endoplasmic reticulum-Golgi intermediate compartment protein 3 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-5061.86Show/hide
Query:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKSF-KSDVH----------------------------------------------------RVVPTVYK
        G GCNI      +  L V  +  GNFHFAPGKSF +S+VH                                                    +VVPTVYK
Subjt:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKSF-KSDVH----------------------------------------------------RVVPTVYK

Query:  DVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS
        DVSGNTIQSNQFSVTEHV+TAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSF+YHGQKVIKKKMELGKFS
Subjt:  DVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS

KAG7029620.1 Endoplasmic reticulum-Golgi intermediate compartment protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-77100Show/hide
Query:  MNWMGGLGCNITITVANFWRLSVKSVLPGNFHFAPGKSFKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEE
        MNWMGGLGCNITITVANFWRLSVKSVLPGNFHFAPGKSFKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEE
Subjt:  MNWMGGLGCNITITVANFWRLSVKSVLPGNFHFAPGKSFKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEE

Query:  HVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS
        HVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS
Subjt:  HVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS

XP_016569315.1 PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2 [Capsicum annuum]2.8e-4970.78Show/hide
Query:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKS-------------FKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSP
        G GCN+      +  L V  V  GNFHFAPGKS             F+ D + VVPTVY DVSG+TIQSNQFSVTEH + A+VGR QS+P VFFFYDLSP
Subjt:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKS-------------FKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSP

Query:  IKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS
        IKVTFTE+HVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQK IKKKMELGKFS
Subjt:  IKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS

XP_022962353.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucurbita moschata]1.0e-4899.02Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        +VVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK

Query:  FS
        FS
Subjt:  FS

XP_022997179.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucurbita maxima]1.0e-4899.02Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        +VVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK

Query:  FS
        FS
Subjt:  FS

TrEMBL top hitse value%identityAlignment
A0A1U8GDY7 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X21.3e-4970.78Show/hide
Query:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKS-------------FKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSP
        G GCN+      +  L V  V  GNFHFAPGKS             F+ D + VVPTVY DVSG+TIQSNQFSVTEH + A+VGR QS+P VFFFYDLSP
Subjt:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKS-------------FKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSP

Query:  IKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS
        IKVTFTE+HVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQK IKKKMELGKFS
Subjt:  IKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS

A0A5A7VB46 Endoplasmic reticulum-Golgi intermediate compartment protein 3-like7.3e-4896.08Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        +VVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTE HVSFLHFLTNVCAIVGG+FTVSGILDSFIYHGQKVIKKKME+GK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK

Query:  FS
        FS
Subjt:  FS

A0A6J1HEK1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like5.1e-4999.02Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        +VVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK

Query:  FS
        FS
Subjt:  FS

A0A6J1KAQ7 endoplasmic reticulum-Golgi intermediate compartment protein 3-like5.1e-4999.02Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        +VVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK

Query:  FS
        FS
Subjt:  FS

A0A6J1KI48 endoplasmic reticulum-Golgi intermediate compartment protein 3-like1.5e-4897.06Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        +VVPTVYKDVSGNTIQSNQFSVTEHV+TAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSF+YHGQKVIKKKMELGK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK

Query:  FS
        FS
Subjt:  FS

SwissProt top hitse value%identityAlignment
Q4R8X1 Endoplasmic reticulum-Golgi intermediate compartment protein 37.6e-2656.86Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL
        +VVPTVY  V G  +++NQFSVT H + A  G L  Q LP VF  Y+LSP+ V  TE+H SF HFLT VCAI+GG+FTV+G++DS IYH  + I+KK++L
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL

Query:  GK
        GK
Subjt:  GK

Q5EAE0 Endoplasmic reticulum-Golgi intermediate compartment protein 31.3e-2555.88Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL
        +VVPTVY  V G  +++NQFSVT H + A  G +  Q LP VF  Y+LSP+ V  TE+H SF HFLT VCAI+GG+FTV+G++DS IYH  + I+KK++L
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL

Query:  GK
        GK
Subjt:  GK

Q5R8G3 Endoplasmic reticulum-Golgi intermediate compartment protein 37.6e-2656.86Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL
        +VVPTVY  V G  +++NQFSVT H + A  G L  Q LP VF  Y+LSP+ V  TE+H SF HFLT VCAI+GG+FTV+G++DS IYH  + I+KK++L
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL

Query:  GK
        GK
Subjt:  GK

Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 37.6e-2656.86Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL
        +VVPTVY  V G  +++NQFSVT H + A  G L  Q LP VF  Y+LSP+ V  TE+H SF HFLT VCAI+GG+FTV+G++DS IYH  + I+KK++L
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL

Query:  GK
        GK
Subjt:  GK

Q9Y282 Endoplasmic reticulum-Golgi intermediate compartment protein 37.6e-2656.86Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL
        +VVPTVY  V G  +++NQFSVT H + A  G L  Q LP VF  Y+LSP+ V  TE+H SF HFLT VCAI+GG+FTV+G++DS IYH  + I+KK++L
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRL--QSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL

Query:  GK
        GK
Subjt:  GK

Arabidopsis top hitse value%identityAlignment
AT1G22200.1 Endoplasmic reticulum vesicle transporter protein2.2e-4175.49Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        +VVP++Y DV  NTIQSNQFSVTEH +  E GR+QS P VFF+YDLSPIKV F E+HV FLHFLTNVCAIVGG+FTVSGI+DSFIYHGQ+ IKKKME+GK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK

Query:  FS
        F+
Subjt:  FS

AT1G36050.1 Endoplasmic reticulum vesicle transporter protein5.2e-4654.74Show/hide
Query:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKSF-KSDVH----------------------------------------------------RVVPTVYK
        G GCNI      +  L V  V  GNFHFAPGKSF +S VH                                                    +VVPTVY 
Subjt:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKSF-KSDVH----------------------------------------------------RVVPTVYK

Query:  DVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL
        D+ G+TIQSNQFSVTEHV+++E G+LQSLP VFFFYDLSPIKVTFTEEH+SFLHFLTNVCAIVGGVFTVSGI+D+FIYHGQK IKKKME+
Subjt:  DVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMEL

AT1G36050.2 Endoplasmic reticulum vesicle transporter protein1.9e-4855.67Show/hide
Query:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKSF-KSDVH----------------------------------------------------RVVPTVYK
        G GCNI      +  L V  V  GNFHFAPGKSF +S VH                                                    +VVPTVY 
Subjt:  GLGCNITITVANFWRLSVKSVLPGNFHFAPGKSF-KSDVH----------------------------------------------------RVVPTVYK

Query:  DVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS
        D+ G+TIQSNQFSVTEHV+++E G+LQSLP VFFFYDLSPIKVTFTEEH+SFLHFLTNVCAIVGGVFTVSGI+D+FIYHGQK IKKKME+GKFS
Subjt:  DVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS

AT3G22290.1 Endoplasmic reticulum vesicle transporter protein1.5e-1643.16Show/hide
Query:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKK
        ++VPT Y+ +S + + +NQ+SVTE+  T      ++ PAV+F YDLSPI VT  EE  SFLH +T +CA++GG F ++G+LD +++   +   KK
Subjt:  RVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKK

AT4G27080.1 PDI-like 5-42.1e-1550.65Show/hide
Query:  EHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK
        E+   + V     LP   F ++LSP++V  TE   SF HF+TNVCAI+GGVFTV+GILDS ++H    + KK+ELGK
Subjt:  EHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGGATGGGTGGATTAGGATGCAATATTACTATAACTGTTGCAAATTTTTGGAGGTTATCAGTAAAAAGCGTCCTGCCTGGAAATTTTCACTTTGCACCTGGGAA
AAGCTTTAAGTCCGATGTTCATAGGGTTGTACCAACTGTTTACAAGGATGTTAGCGGGAATACCATCCAGTCAAACCAGTTCTCTGTCACAGAACATGTAAGGACTGCAG
AAGTTGGACGGCTTCAGTCACTTCCTGCAGTTTTCTTCTTCTATGATCTTTCTCCCATCAAGGTCACATTCACCGAGGAGCACGTGTCATTCCTCCACTTCCTGACAAAT
GTATGCGCTATAGTTGGAGGCGTGTTCACGGTCTCAGGAATATTAGATTCATTCATATATCATGGTCAGAAGGTGATCAAGAAAAAGATGGAGCTTGGTAAGTTCAGCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGAATTGGATGGGTGGATTAGGATGCAATATTACTATAACTGTTGCAAATTTTTGGAGGTTATCAGTAAAAAGCGTCCTGCCTGGAAATTTTCACTTTGCACCTGGGAA
AAGCTTTAAGTCCGATGTTCATAGGGTTGTACCAACTGTTTACAAGGATGTTAGCGGGAATACCATCCAGTCAAACCAGTTCTCTGTCACAGAACATGTAAGGACTGCAG
AAGTTGGACGGCTTCAGTCACTTCCTGCAGTTTTCTTCTTCTATGATCTTTCTCCCATCAAGGTCACATTCACCGAGGAGCACGTGTCATTCCTCCACTTCCTGACAAAT
GTATGCGCTATAGTTGGAGGCGTGTTCACGGTCTCAGGAATATTAGATTCATTCATATATCATGGTCAGAAGGTGATCAAGAAAAAGATGGAGCTTGGTAAGTTCAGCTG
ATAATTGAGCTCGATCTATTTGAGGTGTCGATGCTGCTTATGAAGCCCGGCAGCAAATTACAACTGTGAGATGATGATCAAATCAAGAGAAGAATGAAATGGTTCGATGG
CTGTATTCAATTATGGATGAAGTTTGTTGCCATGATTTTAGTGAGAGTTAGAAAGGAAGGAGCTTAGCTTAGCTCTCCCAGCTCTGTTTCATATTTAAAAAAGAAAAACC
ACTTGTTTACAGTTTAACGAGTCCTTTTAACTGTCGTAGTAAATGTGAATATCCCACATGAAGAGGTAAAAGACAGGATTCTCATCATCCCCACCACCACCATTGGATTT
CTTTTTGTCATAGGTTTGACTTTTGACTTTTGACTTTTGACTTTTGACTTTTGACTTTTGACTTT
Protein sequenceShow/hide protein sequence
MNWMGGLGCNITITVANFWRLSVKSVLPGNFHFAPGKSFKSDVHRVVPTVYKDVSGNTIQSNQFSVTEHVRTAEVGRLQSLPAVFFFYDLSPIKVTFTEEHVSFLHFLTN
VCAIVGGVFTVSGILDSFIYHGQKVIKKKMELGKFS