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Carg09242 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09242
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNudix hydrolase
Genome locationCarg_Chr05:2361447..2362104
RNA-Seq ExpressionCarg09242
SyntenyCarg09242
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029598.1 hypothetical protein SDJN02_07938 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-26100Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMRLSAMSFTFLFTTLVEIDCFDFHCGSCLGIGGL
        MSDLVARTGRHQQRYDAGCRLIAGLVKMRLSAMSFTFLFTTLVEIDCFDFHCGSCLGIGGL
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMRLSAMSFTFLFTTLVEIDCFDFHCGSCLGIGGL
XP_008445383.1 PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo]1.1e-0486.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
XP_022961746.1 nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata]1.1e-0486.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
XP_023545558.1 nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]1.1e-0486.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
XP_038886652.1 nudix hydrolase 16, mitochondrial isoform X2 [Benincasa hispida]1.1e-0486.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
TrEMBL top hitse value%identityAlignment
A0A1S3BDF1 nudix hydrolase 16, mitochondrial isoform X15.5e-0586.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
A0A5A7VFY1 Nudix hydrolase 165.5e-0586.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
A0A6J1BSN1 nudix hydrolase 16, mitochondrial isoform X15.5e-0586.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
A0A6J1HB74 nudix hydrolase 16, mitochondrial-like isoform X15.5e-0586.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
A0A7J7CHW6 Nudix hydrolase 16 mitochondrial-like5.5e-0586.21Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        MSDLVARTGRHQQRYDAGCRLIAG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12600.1 nudix hydrolase homolog 162.0e-0465.52Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR
        M DLVARTGR QQRY+ G RL+AG +  R
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGLVKMR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTTGGTGAAAATGAGGTTGTCGGCAATGTCATTTACGTT
TCTTTTTACTACCCTTGTGGAAATTGACTGCTTTGATTTTCACTGTGGTTCTTGTTTGGGTATTGGTGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
TGAATCCACCGGATTCTCCCAAACCCTTCTGGACCCACTGTTTTCCCTTTTGACCATCAAATCCCCTCCCCTGTTTTGACCCAACCCCACCGCCAGATCCGCTTCAGCCG
CAACCTTCTCCATCTTGGTTCCTCTCCTTTCTGCAACCAACTACCTCTCCCCAACCCTAACAATCGACATTCATCGCCACTCTTCCATGGAGTTTGAGATCGTCTTTGAC
TGTCCATTCTGAGAGAGATTGACAATGGCGGAATTTGTCCTCTGCTGTAGCGATGTGCAGGATTTTGCATTCGTCTCAAAACGCTGAACCCGACGGACGATAGTTTTTGT
ATACGTATATATTTGTTTAGTATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTTGGTGAAAATGAGGTT
GTCGGCAATGTCATTTACGTTTCTTTTTACTACCCTTGTGGAAATTGACTGCTTTGATTTTCACTGTGGTTCTTGTTTGGGTATTGGTGGTTTGTGA
Protein sequenceShow/hide protein sequence
MSDLVARTGRHQQRYDAGCRLIAGLVKMRLSAMSFTFLFTTLVEIDCFDFHCGSCLGIGGL