; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09279 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09279
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationCarg_Chr05:2180818..2184972
RNA-Seq ExpressionCarg09279
SyntenyCarg09279
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598627.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.8e-212100Show/hide
Query:  EKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQP
        EKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQP
Subjt:  EKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQP

Query:  CRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHII
        CRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHII
Subjt:  CRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHII

Query:  RLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVL
        RLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVL
Subjt:  RLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVL

Query:  VDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        VDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
Subjt:  VDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

KAG7029563.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-218100Show/hide
Query:  AETQFSSFVVAEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQ
        AETQFSSFVVAEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQ
Subjt:  AETQFSSFVVAEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQ

Query:  RMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSK
        RMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSK
Subjt:  RMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSK

Query:  SEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLS
        SEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLS
Subjt:  SEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLS

Query:  RGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        RGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
Subjt:  RGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

XP_022962595.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata]3.1e-18899.7Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
        MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR KRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
        ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV

Query:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
Subjt:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

XP_022997209.1 clp protease adapter protein ClpF, chloroplastic isoform X2 [Cucurbita maxima]1.4e-18096.14Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
        MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTS PTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
        ESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEIAQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV

Query:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        D+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Subjt:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

XP_023547352.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita pepo subsp. pepo]2.1e-18497.63Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
        MVQDLSIHALTALGDPKVYGSTLSWRKNF QTSPPTHLTSRQFFWHQRMRSFSLASQPCRSK+GNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
        ESAEYSFRLGQKT+HKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV

Query:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        D+AGDFIPVKQLREKYNRPRHE+PYDPQDDDEQ+ DD
Subjt:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

TrEMBL top hitse value%identityAlignment
A0A1S3BCC1 uncharacterized protein LOC1034884811.7e-16388.24Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILI
        MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQPCRSKRG+FK++AGWLF+GGGQ    RIERSENANNDILI
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV
        FFFQLDLATRVQYALNIEQYEIAQELR KLTEVE E+IKQQESK+GLTSKSEVQDKGL+IIRLRADLQKAIESENY  AAQLRD+ISKLETESLAASAKV
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF
        LAYESAEYSFRLGQK RHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Subjt:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF

Query:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        YGVDSAGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Subjt:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 12.2e-16387.94Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILI
        MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQPCRSKRG+FK++AGWLF+GGGQ    RIERSENANNDILI
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV
        FFFQLDLATRVQYALNIEQYEIAQELR KLTEVE E+IKQQESK+GLTSKSEVQDKGL+IIRLRADLQKAIESENY  AAQLRD+ISKLETESLAASAKV
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF
        LAYESAEYSFRLGQK RHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Subjt:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF

Query:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        YGVDSAGDFIP+KQLREKYNRPRHE+P+DPQ DDEQ+GDD
Subjt:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic1.5e-18899.7Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
        MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR KRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
        ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV

Query:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
Subjt:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

A0A6J1KAU5 clp protease adapter protein ClpF, chloroplastic isoform X26.7e-18196.14Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
        MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTS PTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
        ESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEIAQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV

Query:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        D+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Subjt:  DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

A0A6J1KD74 clp protease adapter protein ClpF, chloroplastic isoform X12.1e-17995.58Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
        MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTS PTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDT--ERFDHPYNSFLFY
        ESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEIAQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDT  ERFDHPYNSFLFY
Subjt:  ESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDT--ERFDHPYNSFLFY

Query:  GVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
        GVD+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Subjt:  GVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 212.9e-0832.73Show/hide
Query:  FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDF
        + +G   +HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  +   HP +   ++   +   +
Subjt:  FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDF

Query:  IPVKQLREKY
        IP  +L  +Y
Subjt:  IPVKQLREKY

Q5R5S1 F-box only protein 212.9e-0832.73Show/hide
Query:  FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDF
        + +G   +HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  +   HP +   ++   +   +
Subjt:  FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDF

Query:  IPVKQLREKY
        IP  +L  +Y
Subjt:  IPVKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic1.0e-11467.37Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILI
        MVQ  S+  LT  G  KV  S L  R N  + S        S QF   ++  SF  +      +R   +V+A W F+GGG QGLD   ERSE+AN DILI
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV
        FFFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE+Y  AA+LRD+ISKLE ESLA SAK 
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF
        LA+E AEY+FRLGQK RHK FGYR V+CGMDP+C ESSSWME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHPY SFL+
Subjt:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF

Query:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD
        YG D+AGDFIPVKQLREKYNRPRHEVP+D QD+D
Subjt:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD

Q8VDH1 F-box only protein 215.0e-0830.23Show/hide
Query:  ESLAASAKVLAYES-AEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTER
        E +    K+ + E   +  + +G   +HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  + 
Subjt:  ESLAASAKVLAYES-AEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTER

Query:  FDHPYNSFLFYGVDSAGDFIPVKQLREKY
          HP +   ++   +   +IP  +L  +Y
Subjt:  FDHPYNSFLFYGVDSAGDFIPVKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein7.4e-11667.37Show/hide
Query:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILI
        MVQ  S+  LT  G  KV  S L  R N  + S        S QF   ++  SF  +      +R   +V+A W F+GGG QGLD   ERSE+AN DILI
Subjt:  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV
        FFFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE+Y  AA+LRD+ISKLE ESLA SAK 
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF
        LA+E AEY+FRLGQK RHK FGYR V+CGMDP+C ESSSWME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHPY SFL+
Subjt:  LAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF

Query:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD
        YG D+AGDFIPVKQLREKYNRPRHEVP+D QD+D
Subjt:  YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD

AT2G03390.2 uvrB/uvrC motif-containing protein3.2e-9577.27Show/hide
Query:  LNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQ
        +N+EQY+IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE+Y  AA+LRD+ISKLE ESLA SAK LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQ

Query:  KTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQ
        K RHK FGYR V+CGMDP+C ESSSWME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHPY SFL+YG D+AGDFIPVKQ
Subjt:  KTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQ

Query:  LREKYNRPRHEVPYDPQDDD
        LREKYNRPRHEVP+D QD+D
Subjt:  LREKYNRPRHEVPYDPQDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTGAAACTCAATTTTCATCATTTGTGGTTGCAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGT
ACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGAT
CAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAA
CCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGA
TATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTCG
AAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGTGCAGATTTGCAGAAGGCT
ATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGA
ATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAG
CACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGTTGCTGAGGAAAATCTT
CTTGTTCCTGAAGAACCAGATACGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGA
GAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
GCTGAAACTCAATTTTCATCATTTGTGGTTGCAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGT
ACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGAT
CAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAA
CCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGA
TATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTCG
AAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGTGCAGATTTGCAGAAGGCT
ATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGA
ATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAG
CACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGTTGCTGAGGAAAATCTT
CTTGTTCCTGAAGAACCAGATACGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGA
GAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGAGCGACACACATTTTTTGAAATCCATCATTCAACACCT
TCAAAAAAATGGTTCGTTCATCTCTCATTTCTTCCGAGTCCTCCTTTAATTCTCTCCTTGTGTGGTAAACTTTCCATATTCGTTGATTTTCTGGAGATTTGATGAACTTG
ATAGCTGAAAATTCTGAATAAGTATTGTACATGTCATATATATATATATACACACACACACACACATAGCATCTCGTTATTTTCTTCTCTTTTCCTTGATACTGATTTTC
AAGTGTTATACTTGACAACGAGATCGAGATCGATCAAGTTCTTCGCTCGATAGCCATTTAGTTTTGATTTTTGAATTTAAAAAATTAAGCTTATAAAACT
Protein sequenceShow/hide protein sequence
AETQFSSFVVAEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQ
PCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKA
IESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENL
LVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD