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Carg09296 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09296
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:2093371..2094015
RNA-Seq ExpressionCarg09296
SyntenyCarg09296
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064730.1 putative transmembrane protein [Cucumis melo var. makuwa]1.7e-7673.66Show/hide
Query:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAAD-NKPDENASPT---------VNPSGGETGNDGDEQGVKELPLP
        MVRSFPTD+NPLIHPAISL LLAAGMAAAIAMITTLCG RSR+  T SEASSPTA + NK +EN SPT          NPS  ET N+G+   VKELPLP
Subjt:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAAD-NKPDENASPT---------VNPSGGETGNDGDEQGVKELPLP

Query:  PKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPS
        PKMQQ+ S+SPP QI KSASERKL HM+SM++ VPRSLSV R++LD+GR ++K+KIKGEDSIWTKTIILGEKCKV+DEEDGIIYEGKGKKI+AYHPRAPS
Subjt:  PKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPS

Query:  SMSASLSRQGSAIDAEALPSPEDK
        SMS S+SRQ SA +AEALP+ E K
Subjt:  SMSASLSRQGSAIDAEALPSPEDK

KAG6585751.1 hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sororia]7.8e-5363.82Show/hide
Query:  LAAGMAAAIAMITTLCG--DRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDG--DEQGVKELPLPPKMQQLGSASPPTQISKSAS
        +AAGM AAIAMIT LCG   RSR++   SEASS T AD K D N S T         P  GE+GNDG   E+ +KELPLPPKMQQ+ S SPP++I+KSAS
Subjt:  LAAGMAAAIAMITTLCG--DRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDG--DEQGVKELPLPPKMQQLGSASPPTQISKSAS

Query:  ERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQGSAIDAEALP
        ER+L HM S+N+ VPRS SVAR +L++G  ++K+K+  E+ IW KTIILGEKC+V+DEEDG+IYEGKGK+ISAYHPR+PSSMS S+SRQ SAIDAEALP
Subjt:  ERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQGSAIDAEALP

KAG6598610.1 hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sororia]1.8e-110100Show/hide
Query:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSAS
        MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSAS
Subjt:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSAS

Query:  PPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQG
        PPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQG
Subjt:  PPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQG

Query:  SAIDAEALPSPEDK
        SAIDAEALPSPEDK
Subjt:  SAIDAEALPSPEDK

KGN47811.2 hypothetical protein Csa_018925 [Cucumis sativus]9.2e-7873.76Show/hide
Query:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDGDEQGVKELPLPPKM
        MVRSFPTD+NPLIHPAI L LLAAGMAAAI+MITTLCG RSR+  T SE SS  AADNK DEN SPT        NPSGGE  N+G+   +KELPLPPKM
Subjt:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDGDEQGVKELPLPPKM

Query:  QQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMS
        QQ+ S SPP+QISKSASERKL HM+SM++ VPRSLSV R++LD+GR ++K++IKGEDSIWTKTIILGEKCKV+DEEDGIIYEGKGKKI+AYHPRAPSSMS
Subjt:  QQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMS

Query:  ASLSRQGSAIDAEALPSPEDK
         S+SRQ SA++AEAL S E K
Subjt:  ASLSRQGSAIDAEALPSPEDK

XP_023002698.1 uncharacterized protein LOC111496482 [Cucurbita maxima]8.1e-6666.51Show/hide
Query:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDG--DEQGVKELPLPP
        MV SFPTDEN LIHPAISL+L+AAGM  AIAMIT LCG RSR++P+ SEASS T AD K D N S T         P+ G++G+DG   E+ +KELPLPP
Subjt:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDG--DEQGVKELPLPP

Query:  KMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSS
        KMQQ+ S SPP+QI+KSASER+L HM  MN+ VPRS SVAR +L++G  ++K+K+K E+ IW KTIILGEKC+V+DEEDG+IYEGKGK+ISAYHPR+PSS
Subjt:  KMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSS

Query:  MSASLSRQGSAIDAEALP
        MS S+SRQ SAIDAEALP
Subjt:  MSASLSRQGSAIDAEALP

TrEMBL top hitse value%identityAlignment
A0A0A0KD46 Uncharacterized protein4.1e-6371.58Show/hide
Query:  MITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNV
        MITTLCG RSR+  T SE SS  AADNK DEN SPT        NPSGGE  N+G+   +KELPLPPKMQQ+ S SPP+QISKSASERKL HM+SM++ V
Subjt:  MITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNV

Query:  PRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQGSAIDAEALPSPEDK
        PRSLSV R++LD+GR ++K++IKGEDSIWTKTIILGEKCKV+DEEDGIIYEGKGKKI+AYHPRAPSSMS S+SRQ SA++AEAL S E K
Subjt:  PRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQGSAIDAEALPSPEDK

A0A498HTS8 Uncharacterized protein1.8e-3143.42Show/hide
Query:  MVRSFPTDE-NPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDGDEQGV------------KEL
        M R+ PTDE N LIHP +SLS  AA MAA IA+IT+LC  R + + ++SE+ +   A+ + D   + T   + GETGN   +Q              KEL
Subjt:  MVRSFPTDE-NPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDGDEQGV------------KEL

Query:  PLPPKMQQ-----LGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHN--LDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKK
        PLPP+M+       G+     Q+ KSASER+L  + ++++ +PRSLS+AR +   ++   +K  K+K EDS+W KTIILGEKCKV DE++ +IY+ KG++
Subjt:  PLPPKMQQ-----LGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHN--LDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKK

Query:  ISAYHPRAPSSMSASLSRQGSAIDAEAL
        I AYHPR         SRQ S ID  AL
Subjt:  ISAYHPRAPSSMSASLSRQGSAIDAEAL

A0A5A7VC31 Putative transmembrane protein8.4e-7773.66Show/hide
Query:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAAD-NKPDENASPT---------VNPSGGETGNDGDEQGVKELPLP
        MVRSFPTD+NPLIHPAISL LLAAGMAAAIAMITTLCG RSR+  T SEASSPTA + NK +EN SPT          NPS  ET N+G+   VKELPLP
Subjt:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAAD-NKPDENASPT---------VNPSGGETGNDGDEQGVKELPLP

Query:  PKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPS
        PKMQQ+ S+SPP QI KSASERKL HM+SM++ VPRSLSV R++LD+GR ++K+KIKGEDSIWTKTIILGEKCKV+DEEDGIIYEGKGKKI+AYHPRAPS
Subjt:  PKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPS

Query:  SMSASLSRQGSAIDAEALPSPEDK
        SMS S+SRQ SA +AEALP+ E K
Subjt:  SMSASLSRQGSAIDAEALPSPEDK

A0A6A1WQ24 Uncharacterized protein1.6e-3545.41Show/hide
Query:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDR-------------SRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDG----DEQG
        MVR  PT+E PL HP +S SLLA G+AAAIA IT LCG R               KT    +AS+ TA          P+   +   T ++G     E  
Subjt:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDR-------------SRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDG----DEQG

Query:  VKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISA
         +ELPLPP M  +  +    +I+KS+S+R L   K++ + +PRSLS+AR   +D   +KK  +  EDSIW KTIILGEKCKV DE+D +IY+GKGK+IS 
Subjt:  VKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISA

Query:  YHPRAPSSMSASLSRQGSAIDAEALPSPE
        YHP+ PS +  SLSR+GS  + EA P PE
Subjt:  YHPRAPSSMSASLSRQGSAIDAEALPSPE

A0A6J1KUB9 uncharacterized protein LOC1114964823.9e-6666.51Show/hide
Query:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDG--DEQGVKELPLPP
        MV SFPTDEN LIHPAISL+L+AAGM  AIAMIT LCG RSR++P+ SEASS T AD K D N S T         P+ G++G+DG   E+ +KELPLPP
Subjt:  MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDG--DEQGVKELPLPP

Query:  KMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSS
        KMQQ+ S SPP+QI+KSASER+L HM  MN+ VPRS SVAR +L++G  ++K+K+K E+ IW KTIILGEKC+V+DEEDG+IYEGKGK+ISAYHPR+PSS
Subjt:  KMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSS

Query:  MSASLSRQGSAIDAEALP
        MS S+SRQ SAIDAEALP
Subjt:  MSASLSRQGSAIDAEALP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G26114.1 unknown protein1.4e-0434.57Show/hide
Query:  VARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSA-SLSRQGSAIDAEALP
        V + + ++ +  +K K+  ++SI    IILGE+C+V D E+G   E + ++++      P SMS+ S+SR  S ID  A+P
Subjt:  VARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSA-SLSRQGSAIDAEALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAAGCTTTCCGACGGATGAGAACCCGTTAATTCATCCGGCGATTTCCCTCTCCCTTCTAGCGGCTGGGATGGCAGCCGCCATCGCTATGATCACCACCTTATG
CGGTGACCGATCCCGGAAAACACCCACAGCCTCTGAAGCTTCATCTCCAACCGCCGCCGATAACAAACCAGACGAAAACGCTTCCCCGACGGTGAACCCATCCGGCGGAG
AAACAGGAAACGACGGCGACGAACAGGGTGTGAAAGAACTTCCCCTGCCTCCGAAAATGCAACAGCTCGGGAGTGCAAGCCCGCCGACGCAAATTTCTAAATCGGCGTCG
GAAAGGAAATTAACCCATATGAAAAGTATGAACGTTAATGTTCCGAGAAGCCTGTCGGTGGCGCGGCACAATTTAGACGATGGGCGGCATAAGAAAAAGGATAAGATTAA
AGGGGAAGATTCGATTTGGACGAAGACCATAATTTTAGGGGAGAAATGCAAAGTTACAGATGAAGAAGATGGGATTATTTATGAAGGAAAAGGGAAGAAGATATCGGCGT
ATCATCCGAGAGCTCCGAGTTCGATGTCGGCGTCGCTTTCTAGGCAAGGATCCGCCATTGATGCGGAAGCTCTGCCCAGCCCAGAAGATAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGAAGCTTTCCGACGGATGAGAACCCGTTAATTCATCCGGCGATTTCCCTCTCCCTTCTAGCGGCTGGGATGGCAGCCGCCATCGCTATGATCACCACCTTATG
CGGTGACCGATCCCGGAAAACACCCACAGCCTCTGAAGCTTCATCTCCAACCGCCGCCGATAACAAACCAGACGAAAACGCTTCCCCGACGGTGAACCCATCCGGCGGAG
AAACAGGAAACGACGGCGACGAACAGGGTGTGAAAGAACTTCCCCTGCCTCCGAAAATGCAACAGCTCGGGAGTGCAAGCCCGCCGACGCAAATTTCTAAATCGGCGTCG
GAAAGGAAATTAACCCATATGAAAAGTATGAACGTTAATGTTCCGAGAAGCCTGTCGGTGGCGCGGCACAATTTAGACGATGGGCGGCATAAGAAAAAGGATAAGATTAA
AGGGGAAGATTCGATTTGGACGAAGACCATAATTTTAGGGGAGAAATGCAAAGTTACAGATGAAGAAGATGGGATTATTTATGAAGGAAAAGGGAAGAAGATATCGGCGT
ATCATCCGAGAGCTCCGAGTTCGATGTCGGCGTCGCTTTCTAGGCAAGGATCCGCCATTGATGCGGAAGCTCTGCCCAGCCCAGAAGATAAGTAG
Protein sequenceShow/hide protein sequence
MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSAS
ERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSASLSRQGSAIDAEALPSPEDK