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Carg09298 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09298
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEukaryotic initiation factor 4A
Genome locationCarg_Chr05:2086514..2088648
RNA-Seq ExpressionCarg09298
SyntenyCarg09298
Gene Ontology termsGO:0002183 - cytoplasmic translational initiation (biological process)
GO:0003724 - RNA helicase activity (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029544.1 hypothetical protein SDJN02_07883 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-34100Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYGIHTLSLFLLHHFSGFYF
        MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYGIHTLSLFLLHHFSGFYF
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYGIHTLSLFLLHHFSGFYF

XP_020264540.1 eukaryotic initiation factor 4A-8-like [Asparagus officinalis]3.3e-2291.53Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG+A EG+QFDARQ+DSKMNDLLGGDGQDFFTSYDEVYESFD MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

XP_022131985.1 eukaryotic initiation factor 4A-15 [Momordica charantia]8.7e-2393.22Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMA EGTQFDARQ+D+KMNDLLGGDGQDFFTSYDEVY+SFDSMGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

XP_022962093.1 eukaryotic initiation factor 4A-15-like [Cucurbita moschata]2.1e-24100Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

XP_022997163.1 eukaryotic initiation factor 4A-15-like [Cucurbita maxima]6.1e-2498.31Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMAAEG+QFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

TrEMBL top hitse value%identityAlignment
A0A5P1EVA1 Uncharacterized protein1.6e-2291.53Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG+A EG+QFDARQ+DSKMNDLLGGDGQDFFTSYDEVYESFD MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

A0A5P1FVV4 Uncharacterized protein1.4e-2189.83Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMAAEG+QFDARQ+D+KMNDLL  DGQDFFTSYDEVY+SFDSMGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

A0A6J1BR72 eukaryotic initiation factor 4A-154.2e-2393.22Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMA EGTQFDARQ+D+KMNDLLGGDGQDFFTSYDEVY+SFDSMGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

A0A6J1HDQ7 eukaryotic initiation factor 4A-15-like1.0e-24100Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

A0A6J1KD24 eukaryotic initiation factor 4A-15-like2.9e-2498.31Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMAAEG+QFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

SwissProt top hitse value%identityAlignment
P41381 Eukaryotic initiation factor 4A-81.3e-2181.36Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MA +A +G QFDARQ+DSKMNDLL  DG+DFFTSYDEVY+SFD+MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

P41382 Eukaryotic initiation factor 4A-103.2e-2076.27Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG+A EG+QFDARQ+D+KM +LLG + ++FFTSYDEVY+SFD+MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

Q40465 Eukaryotic initiation factor 4A-116.5e-2179.66Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG+A EG+QFDARQ+D+KM +LLG + Q+FFTSYDEVYESFD+MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

Q40468 Eukaryotic initiation factor 4A-151.2e-2284.75Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG A EG+QFDARQFD+KMN+LL  DGQDFFTSYDEVY+SFD+MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

Q40471 Eukaryotic initiation factor 4A-98.5e-2179.66Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG A EG+QFDARQ+DSKM +LL  +GQDFFTSYDEVY SFD+MGL+ENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

Arabidopsis top hitse value%identityAlignment
AT1G54270.1 eif4a-21.3e-1978.33Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQD-FFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG A EGTQFD RQFD ++N++L  DGQD FFTSYDEV+ESFD+MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQD-FFTSYDEVYESFDSMGLQENLLRGIYAYG

AT1G54270.2 eif4a-21.7e-1676.36Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQD-FFTSYDEVYESFDSMGLQENLLRG
        MAG A EGTQFD RQFD ++N++L  DGQD FFTSYDEV+ESFD+MGLQENLLRG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQD-FFTSYDEVYESFDSMGLQENLLRG

AT1G72730.1 DEA(D/H)-box RNA helicase family protein4.5e-1766.67Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQD-FFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAGMA++GTQ+D RQFD+KMN +LG +G++ F+T+YDEV +SFD+M LQ +LLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQD-FFTSYDEVYESFDSMGLQENLLRGIYAYG

AT3G13920.1 eukaryotic translation initiation factor 4A11.6e-1976.27Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG A EGTQFDARQFD K+N++L G   +FFTSYD+V+ESFD+MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG

AT3G13920.2 eukaryotic translation initiation factor 4A11.6e-1976.27Show/hide
Query:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG
        MAG A EGTQFDARQFD K+N++L G   +FFTSYD+V+ESFD+MGLQENLLRGIYAYG
Subjt:  MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGTATGGCAGCTGAAGGAACCCAATTTGATGCACGTCAATTTGATTCCAAGATGAATGATTTGCTTGGGGGAGATGGCCAAGACTTTTTCACCTCATATGATGA
AGTCTATGAGAGTTTTGATTCCATGGGTTTGCAGGAGAATCTCTTAAGAGGAATATATGCTTATGGTATACATACTCTCTCCCTTTTCCTCCTCCATCACTTTTCTGGTT
TCTACTTCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAACGAGAACTTCTTTTAATCATTCAATCAATACCATCCTCTCTCTTCTGCGACGTGACGTTCTTCGAACTCCTCCGGTAACCCGTTCGTACAGAGATCCGAGGAGT
TTGGAAATTTTTCAATCTCTGATTTTCCTGTTCACTCTGTTCCTCCTAAATCTTCCGCCTCCTCGATTTATCGCCCTCGCATTCAGATATGGCTGGTATGGCAGCTGAAG
GAACCCAATTTGATGCACGTCAATTTGATTCCAAGATGAATGATTTGCTTGGGGGAGATGGCCAAGACTTTTTCACCTCATATGATGAAGTCTATGAGAGTTTTGATTCC
ATGGGTTTGCAGGAGAATCTCTTAAGAGGAATATATGCTTATGGTATACATACTCTCTCCCTTTTCCTCCTCCATCACTTTTCTGGTTTCTACTTCTGA
Protein sequenceShow/hide protein sequence
MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYGIHTLSLFLLHHFSGFYF