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Carg09299 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09299
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:2079413..2082740
RNA-Seq ExpressionCarg09299
SyntenyCarg09299
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029543.1 hypothetical protein SDJN02_07882, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-107100Show/hide
Query:  MGHWRRLWRGWRRRAYDGDTEKANRRYHLDSDADAAAAPERYMYEGFLKREWTSFDDCGLELELDAEERRSRLRLSRLSELLPRSLNLLSSGTITVPRSG
        MGHWRRLWRGWRRRAYDGDTEKANRRYHLDSDADAAAAPERYMYEGFLKREWTSFDDCGLELELDAEERRSRLRLSRLSELLPRSLNLLSSGTITVPRSG
Subjt:  MGHWRRLWRGWRRRAYDGDTEKANRRYHLDSDADAAAAPERYMYEGFLKREWTSFDDCGLELELDAEERRSRLRLSRLSELLPRSLNLLSSGTITVPRSG

Query:  LSLFLSSAQFNASFAKLIASSNGQSGIAELYISMVCFNSNFNLFISASSSRCSKEVGRDVKSVQLQLRNYHKHKISNANEQCALTVDCEEAESVDKFEVV
        LSLFLSSAQFNASFAKLIASSNGQSGIAELYISMVCFNSNFNLFISASSSRCSKEVGRDVKSVQLQLRNYHKHKISNANEQCALTVDCEEAESVDKFEVV
Subjt:  LSLFLSSAQFNASFAKLIASSNGQSGIAELYISMVCFNSNFNLFISASSSRCSKEVGRDVKSVQLQLRNYHKHKISNANEQCALTVDCEEAESVDKFEVV

Query:  LKSKF
        LKSKF
Subjt:  LKSKF
PNT02391.1 hypothetical protein POPTR_014G011200, partial [Populus trichocarpa]6.5e-0466.67Show/hide
Query:  RSLNLLSSGTITVPRSGLSLFLSSAQFNASFAKLIASSNGQSGIAELYISM
        +SL+LLSSG  +VPRSGLS  LSSA ++ASFAK  ASS GQSG AE  IS+
Subjt:  RSLNLLSSGTITVPRSGLSLFLSSAQFNASFAKLIASSNGQSGIAELYISM
TrEMBL top hitse value%identityAlignment
A0A2K1XNN5 Uncharacterized protein (Fragment)3.1e-0466.67Show/hide
Query:  RSLNLLSSGTITVPRSGLSLFLSSAQFNASFAKLIASSNGQSGIAELYISM
        +SL+LLSSG  +VPRSGLS  LSSA ++ASFAK  ASS GQSG AE  IS+
Subjt:  RSLNLLSSGTITVPRSGLSLFLSSAQFNASFAKLIASSNGQSGIAELYISM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCACTGGCGAAGGCTATGGCGGGGGTGGCGGCGGCGCGCATATGACGGGGATACAGAGAAGGCTAACCGGAGGTACCACCTCGACTCAGACGCCGACGCCGCCGC
AGCTCCGGAGAGATACATGTATGAAGGTTTCTTGAAGAGAGAGTGGACCTCATTTGATGACTGTGGCCTCGAATTGGAACTTGATGCAGAAGAGCGTAGAAGTAGACTCC
GGCTTTCACGTTTGTCAGAACTCCTCCCAAGATCTCTTAACCTGTTGAGCTCTGGAACTATAACTGTTCCAAGATCTGGCCTGTCTCTCTTCCTCAGTTCAGCGCAATTC
AATGCCAGTTTTGCAAAACTTATAGCCTCCTCCAATGGACAATCTGGAATTGCTGAGCTATACATATCCATGGTTTGCTTTAATTCCAACTTCAATCTTTTCATCTCAGC
CTCTAGTTCCCGCTGTAGCAAAGAAGTCGGCAGAGATGTTAAATCAGTGCAACTGCAACTACGTAACTATCACAAGCACAAAATTTCAAATGCCAATGAACAATGTGCAC
TTACAGTAGATTGTGAGGAAGCAGAGTCCGTTGACAAATTTGAGGTAGTACTGAAATCTAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCACTGGCGAAGGCTATGGCGGGGGTGGCGGCGGCGCGCATATGACGGGGATACAGAGAAGGCTAACCGGAGGTACCACCTCGACTCAGACGCCGACGCCGCCGC
AGCTCCGGAGAGATACATGTATGAAGGTTTCTTGAAGAGAGAGTGGACCTCATTTGATGACTGTGGCCTCGAATTGGAACTTGATGCAGAAGAGCGTAGAAGTAGACTCC
GGCTTTCACGTTTGTCAGAACTCCTCCCAAGATCTCTTAACCTGTTGAGCTCTGGAACTATAACTGTTCCAAGATCTGGCCTGTCTCTCTTCCTCAGTTCAGCGCAATTC
AATGCCAGTTTTGCAAAACTTATAGCCTCCTCCAATGGACAATCTGGAATTGCTGAGCTATACATATCCATGGTTTGCTTTAATTCCAACTTCAATCTTTTCATCTCAGC
CTCTAGTTCCCGCTGTAGCAAAGAAGTCGGCAGAGATGTTAAATCAGTGCAACTGCAACTACGTAACTATCACAAGCACAAAATTTCAAATGCCAATGAACAATGTGCAC
TTACAGTAGATTGTGAGGAAGCAGAGTCCGTTGACAAATTTGAGGTAGTACTGAAATCTAAATTTTGA
Protein sequenceShow/hide protein sequence
MGHWRRLWRGWRRRAYDGDTEKANRRYHLDSDADAAAAPERYMYEGFLKREWTSFDDCGLELELDAEERRSRLRLSRLSELLPRSLNLLSSGTITVPRSGLSLFLSSAQF
NASFAKLIASSNGQSGIAELYISMVCFNSNFNLFISASSSRCSKEVGRDVKSVQLQLRNYHKHKISNANEQCALTVDCEEAESVDKFEVVLKSKF