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Carg09347 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09347
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionInterleukin-2 receptor subunit beta like
Genome locationCarg_Chr05:1716361..1716762
RNA-Seq ExpressionCarg09347
SyntenyCarg09347
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445585.1 PREDICTED: uncharacterized protein LOC103488565 [Cucumis melo]1.1e-3364.66Show/hide
Query:  SFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDEFPFRNFTARFPPPIKER
        SFCCFH          PS +P  SPCSW KST  E   +L RCRY LAR+ARRR  YLAS DFSYDSSSYALNF+DDCR+D +FPFR+FTARFPPP+K+R
Subjt:  SFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDEFPFRNFTARFPPPIKER

Query:  VPAA-KFAGSEDGISV
        +PAA KFAGS   I +
Subjt:  VPAA-KFAGSEDGISV

XP_022131639.1 uncharacterized protein LOC111004768 [Momordica charantia]1.2e-3262.88Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIAR-RRKRYLASVDFSYDSSSYALNFEDDCREDD
        ML  FHHS +FA KLKSS  CF         D PS   T+SPCSWFKST  EF  +L RCRYL+ARI R  R+RY AS DF+YDSSSYALNFEDD R DD
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIAR-RRKRYLASVDFSYDSSSYALNFEDDCREDD

Query:  EFPFRNFTARFPPPIKERVPAAKFAGSEDGIS
        EFP RNF AR P     R+PAAKFAGS+ G+S
Subjt:  EFPFRNFTARFPPPIKERVPAAKFAGSEDGIS

XP_022962228.1 uncharacterized protein LOC111462741 [Cucurbita moschata]1.4e-71100Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
        MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE

Query:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
        FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
Subjt:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE

XP_022997531.1 uncharacterized protein LOC111492424 [Cucurbita maxima]1.7e-6996.24Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
        MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPT+SPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDF+YDSSSYALNF+DDCREDDE
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE

Query:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
        FPFR+FTARFPPPIKER PAAKFAGSEDGISVE
Subjt:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE

XP_023546798.1 uncharacterized protein LOC111805797 [Cucurbita pepo subsp. pepo]6.8e-7199.25Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
        MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPT SPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE

Query:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
        FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
Subjt:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE

TrEMBL top hitse value%identityAlignment
A0A1S3BDX7 uncharacterized protein LOC1034885655.5e-3464.66Show/hide
Query:  SFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDEFPFRNFTARFPPPIKER
        SFCCFH          PS +P  SPCSW KST  E   +L RCRY LAR+ARRR  YLAS DFSYDSSSYALNF+DDCR+D +FPFR+FTARFPPP+K+R
Subjt:  SFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDEFPFRNFTARFPPPIKER

Query:  VPAA-KFAGSEDGISV
        +PAA KFAGS   I +
Subjt:  VPAA-KFAGSEDGISV

A0A6J1BQU1 uncharacterized protein LOC1110047686.0e-3362.88Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIAR-RRKRYLASVDFSYDSSSYALNFEDDCREDD
        ML  FHHS +FA KLKSS  CF         D PS   T+SPCSWFKST  EF  +L RCRYL+ARI R  R+RY AS DF+YDSSSYALNFEDD R DD
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIAR-RRKRYLASVDFSYDSSSYALNFEDDCREDD

Query:  EFPFRNFTARFPPPIKERVPAAKFAGSEDGIS
        EFP RNF AR P     R+PAAKFAGS+ G+S
Subjt:  EFPFRNFTARFPPPIKERVPAAKFAGSEDGIS

A0A6J1FP70 uncharacterized protein LOC1114460222.2e-1948.8Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDD-CREDD
        M+ + +H  +F RKLKSS  CF      DFL++   S  R+P S  KS   EF  +   CR L+ARI R R+RY  S DF YD SSYALNFED+  R+DD
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDD-CREDD

Query:  EFPFRNFTARFP--PPIKERVPAAK
        EFP R+F +R P  PP   R+  AK
Subjt:  EFPFRNFTARFP--PPIKERVPAAK

A0A6J1HE78 uncharacterized protein LOC1114627416.6e-72100Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
        MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE

Query:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
        FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
Subjt:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE

A0A6J1K7R1 uncharacterized protein LOC1114924248.1e-7096.24Show/hide
Query:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE
        MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPT+SPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDF+YDSSSYALNF+DDCREDDE
Subjt:  MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDE

Query:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE
        FPFR+FTARFPPPIKER PAAKFAGSEDGISVE
Subjt:  FPFRNFTARFPPPIKERVPAAKFAGSEDGISVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11070.1 unknown protein1.0e-0835.34Show/hide
Query:  KLKSSFCCFHG---FQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARI----ARRRKRYLASV-----------DFSYDSSSYALNFEDDC
        +++S  CC       + +  +    +   RSP  W KST  E   +  RCR + +RI          Y   V           DFSYD  SYALNFED+ 
Subjt:  KLKSSFCCFHG---FQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARI----ARRRKRYLASV-----------DFSYDSSSYALNFEDDC

Query:  REDDEFPFRNFTARFP
        R DD+  F NFTAR P
Subjt:  REDDEFPFRNFTARFP

AT5G35090.1 unknown protein1.5e-0456.1Show/hide
Query:  SVDFSYDSSSYALNFEDDCRED--DEFPFRNFTARFP--PP
        + DF YD SSYALNF+    +D  D FP RNF+AR P  PP
Subjt:  SVDFSYDSSSYALNFEDDCRED--DEFPFRNFTARFP--PP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCTCATTTTCATCACTCTCCTGCTTTCGCTCGCAAGCTCAAGTCCTCCTTCTGCTGTTTCCATGGCTTCCAACAGGACGACTTCCTCGACTCCCCCTCCAAGTC
GCCGACGAGATCCCCGTGTTCCTGGTTCAAATCTACCGTCGGCGAATTCAGGGGAATACTTGCCCGGTGCCGGTATCTCCTCGCTCGGATCGCTCGCCGGAGGAAAAGGT
ACCTCGCCTCCGTCGACTTTTCCTACGATTCCTCCAGTTATGCCCTCAATTTTGAGGACGATTGCCGTGAAGACGATGAGTTCCCGTTCAGAAATTTTACGGCTAGATTC
CCCCCGCCGATCAAGGAGCGTGTTCCGGCGGCGAAATTCGCCGGTTCTGAAGATGGAATCTCGGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCTCATTTTCATCACTCTCCTGCTTTCGCTCGCAAGCTCAAGTCCTCCTTCTGCTGTTTCCATGGCTTCCAACAGGACGACTTCCTCGACTCCCCCTCCAAGTC
GCCGACGAGATCCCCGTGTTCCTGGTTCAAATCTACCGTCGGCGAATTCAGGGGAATACTTGCCCGGTGCCGGTATCTCCTCGCTCGGATCGCTCGCCGGAGGAAAAGGT
ACCTCGCCTCCGTCGACTTTTCCTACGATTCCTCCAGTTATGCCCTCAATTTTGAGGACGATTGCCGTGAAGACGATGAGTTCCCGTTCAGAAATTTTACGGCTAGATTC
CCCCCGCCGATCAAGGAGCGTGTTCCGGCGGCGAAATTCGCCGGTTCTGAAGATGGAATCTCGGTTGAATGA
Protein sequenceShow/hide protein sequence
MLPHFHHSPAFARKLKSSFCCFHGFQQDDFLDSPSKSPTRSPCSWFKSTVGEFRGILARCRYLLARIARRRKRYLASVDFSYDSSSYALNFEDDCREDDEFPFRNFTARF
PPPIKERVPAAKFAGSEDGISVE