; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09396 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09396
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSec-independent protein translocase protein TATC
Genome locationCarg_Chr05:1464006..1464599
RNA-Seq ExpressionCarg09396
SyntenyCarg09396
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598509.1 hypothetical protein SDJN03_08287, partial [Cucurbita argyrosperma subsp. sororia]3.9e-10799.49Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGP PSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

KAG7029446.1 hypothetical protein SDJN02_07785, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-108100Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

XP_022962625.1 uncharacterized protein LOC111463019 [Cucurbita moschata]1.8e-10497.46Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHR+RQQPPLLPLPRRPFPPTAVG  PSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPS VPLPKFTLRRE+SCNVEAAGVDAGATDNLRRLLRLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

XP_022997633.1 uncharacterized protein LOC111492508 [Cucurbita maxima]6.0e-10094.42Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        ME VLIPFSAERSRSLKSRNF PATVHDG+LN+PPPAVPNYSHR  QQPPLLPLP RPFPPTAVG  PSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGR FETEFSGSAFGVSPPPS VPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

XP_023546813.1 proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]2.3e-9994.42Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        ME VLIPFSAERSRSLKS NF PATVHDGLLNVPPPAVPNYSHR  QQPPLLPLPRRPFPPTAVG  PSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGR FETEFSGS FGVSPPPS VPLPKF LRREVSCNVEAAGVDAGATDNLRRLLRLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

TrEMBL top hitse value%identityAlignment
A0A0A0LN70 Uncharacterized protein1.8e-6568.32Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        ME V IPFSA++SR    +NF PA VH G LN P P +   S R  QQPPLLPLPRRP PP+ +G   S RPK  + RDQSLTPKKSKPIKRSRGPPA K
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFET----EFSGSAFGVSPPPSCVPLPKFTLRRE-VSCNVEAAGVDAGATDNLRRLLR
        ST E +IVDSTNRLGPEPSHVPKDL  +LGLR S P  E  R +ET    EFSGSA+  SPPPS VPLPKF+LRR+ V CNVEA+GVDAGATDNLRRLLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFET----EFSGSAFGVSPPPSCVPLPKFTLRRE-VSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        +R
Subjt:  LR

A0A5A7VG22 Sec-independent protein translocase protein TATC6.1e-6669.31Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        ME VLIPFSA++SRS   +N  PATVH GLLN P   +P    R  QQPPLLPLPRRP PP+  G     R K  K RDQSL PKKSKPIKRSRGPPA K
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFET----EFSGSAFGVSPPPSCVPLPKFTLRRE-VSCNVEAAGVDAGATDNLRRLLR
        ST E +I+DSTNRLGPEP HVPKDLWRVLGLR SAP  +  R +ET    EFSGSA   SPPPS VPLPKF+LRR+ V CNVE AGVDAGATDNLRRLLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFET----EFSGSAFGVSPPPSCVPLPKFTLRRE-VSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

A0A6J1GI76 uncharacterized protein LOC1114544344.3e-5161.84Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSH--RIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPA
        ME VLIP            NF PA           PAV  YSH  R R+QPP  PLPRR FPP+A    PSCRPKG + RDQSL PKKSK IKR R  P 
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSH--RIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPA

Query:  LKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLR---SSAPPREGGRRF----ETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVE-AAGVDAGATDNL
        ++ TAE +IVDSTNR+GPEPSHVPKDL  VLGLR    S+PPREG R      E EFSGSAF VSPPPS VPLP F L R+++CNVE AAG+DAGATDNL
Subjt:  LKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLR---SSAPPREGGRRF----ETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVE-AAGVDAGATDNL

Query:  RRLLRLR
        RRLLRLR
Subjt:  RRLLRLR

A0A6J1HFM4 uncharacterized protein LOC1114630198.8e-10597.46Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHR+RQQPPLLPLPRRPFPPTAVG  PSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPS VPLPKFTLRRE+SCNVEAAGVDAGATDNLRRLLRLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

A0A6J1KEH8 uncharacterized protein LOC1114925082.9e-10094.42Show/hide
Query:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
        ME VLIPFSAERSRSLKSRNF PATVHDG+LN+PPPAVPNYSHR  QQPPLLPLP RPFPPTAVG  PSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK
Subjt:  MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK

Query:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGR FETEFSGSAFGVSPPPS VPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
Subjt:  STAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20070.1 unknown protein1.7e-0732.12Show/hide
Query:  PPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRS
        PPP   +YS     QPPLLPLPR       +  + S RP+   +   +    ++K I  +         AEF+      R G  P    +       LR 
Subjt:  PPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRS

Query:  SAPPREGGRRFETEFSGSAFG-VSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
             +G       + G A   +SPPPS +P+P+F+++ ++ CNVEAAG    AT+N+RR+L+LR
Subjt:  SAPPREGGRRFETEFSGSAFG-VSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

AT3G21570.1 unknown protein2.3e-0444.68Show/hide
Query:  SAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR
        S F VSP PS +PLP F+ +++    V    +D  A+ +LRRLLRL+
Subjt:  SAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR

AT4G02040.1 unknown protein7.1e-0640.28Show/hide
Query:  PALKSTAEF-MIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKF
        P LK   +  +IV +TNR+GPEP  + K +   LGL+S              F+G+   +SPPPSCVP+P F
Subjt:  PALKSTAEF-MIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGTTTTGATTCCATTTTCTGCTGAGAGATCTCGCAGTTTAAAATCCCGTAATTTCTTTCCGGCCACCGTCCACGACGGTCTTCTCAACGTCCCTCCGCCGGC
CGTCCCAAATTATAGTCACCGCATCCGCCAGCAACCGCCTCTCCTCCCTCTGCCCCGCCGTCCGTTTCCCCCTACGGCAGTCGGGCCCCTGCCGTCGTGCCGCCCAAAGG
GTACGAAATCCAGAGATCAGTCTCTTACCCCAAAGAAATCAAAACCAATTAAACGAAGTAGAGGGCCTCCGGCGTTGAAATCGACGGCGGAGTTTATGATCGTTGATTCC
ACGAATCGACTGGGGCCGGAGCCGAGCCACGTGCCTAAAGATTTATGGAGAGTTTTAGGATTACGGTCGTCGGCGCCGCCGAGAGAAGGTGGCCGGCGTTTTGAGACAGA
ATTTTCGGGGTCAGCGTTCGGCGTTTCACCGCCGCCAAGTTGCGTTCCGCTTCCGAAATTCACTCTCAGGCGGGAGGTGAGTTGTAATGTGGAGGCCGCCGGAGTGGATG
CCGGAGCAACCGACAACCTCAGGCGATTATTGCGCCTCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGTTTTGATTCCATTTTCTGCTGAGAGATCTCGCAGTTTAAAATCCCGTAATTTCTTTCCGGCCACCGTCCACGACGGTCTTCTCAACGTCCCTCCGCCGGC
CGTCCCAAATTATAGTCACCGCATCCGCCAGCAACCGCCTCTCCTCCCTCTGCCCCGCCGTCCGTTTCCCCCTACGGCAGTCGGGCCCCTGCCGTCGTGCCGCCCAAAGG
GTACGAAATCCAGAGATCAGTCTCTTACCCCAAAGAAATCAAAACCAATTAAACGAAGTAGAGGGCCTCCGGCGTTGAAATCGACGGCGGAGTTTATGATCGTTGATTCC
ACGAATCGACTGGGGCCGGAGCCGAGCCACGTGCCTAAAGATTTATGGAGAGTTTTAGGATTACGGTCGTCGGCGCCGCCGAGAGAAGGTGGCCGGCGTTTTGAGACAGA
ATTTTCGGGGTCAGCGTTCGGCGTTTCACCGCCGCCAAGTTGCGTTCCGCTTCCGAAATTCACTCTCAGGCGGGAGGTGAGTTGTAATGTGGAGGCCGCCGGAGTGGATG
CCGGAGCAACCGACAACCTCAGGCGATTATTGCGCCTCCGATGA
Protein sequenceShow/hide protein sequence
MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFPPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDS
TNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCNVEAAGVDAGATDNLRRLLRLR