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Carg09405 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09405
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr05:1421341..1421766
RNA-Seq ExpressionCarg09405
SyntenyCarg09405
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8057246.1 hypothetical protein FH972_013952 [Carpinus fangiana]2.6e-3654.23Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RERRGPAWKQGW EQ + SI+PPP PLL I GI+V+LL +SS++N++SQ+  T INFK F  LLPL+ +FV + I +YGR+VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
               P G+ +LL++L++++SYQ YFHSKW+P IW   YY
Subjt:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

KAG6598502.1 hypothetical protein SDJN03_08280, partial [Cucurbita argyrosperma subsp. sororia]2.3e-6997.87Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFS+HRSQVKTT INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        TD TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
Subjt:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

KAG7020455.1 hypothetical protein SDJN02_17139, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-6185.92Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQA+ASI PPP+PLLA+LGILVILLSVSS+S++RSQVK T +NFK+FFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHT-ASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
         + T ASP G A LLVVLLVLISYQPYFHSKWFP+IWRPYYY
Subjt:  TDHT-ASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

KAG7029438.1 hypothetical protein SDJN02_07777, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-72100Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
Subjt:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

XP_031737284.1 uncharacterized protein LOC116402215 [Cucumis sativus]9.4e-6388.81Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA++SITPPP+PLLAILGILVILLSVSS+S++RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        T+   +ASP G AVLLVVLLVL+SYQPYFHSKWFPAIWRPYYY
Subjt:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

TrEMBL top hitse value%identityAlignment
A0A0A0LNS9 Uncharacterized protein4.6e-6388.81Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA++SITPPP+PLLAILGILVILLSVSS+S++RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        T+   +ASP G AVLLVVLLVL+SYQPYFHSKWFPAIWRPYYY
Subjt:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

A0A2P5DBR5 Transmembrane protein1.6e-3653.24Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RE    +WK GW E+ +AS++ PP PL+A++GI+V+LLS+SS++N++SQV+ T I FKLF L LPL+ +F+ NS+ +YG L II+P TK EP   
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY
        +    SP GVA+LL++L+VLISY+ YFHSKW+P +W  Y
Subjt:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY

A0A5A7VAG3 Uncharacterized protein4.6e-6388.81Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA++SITPPP+PLLAILGILVILLSVSS+S++RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        T+   +ASP G AVLLVVLLVL+SYQPYFHSKWFPAIWRPYYY
Subjt:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

A0A5N6R8L3 Uncharacterized protein1.2e-3654.23Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RERRGPAWKQGW EQ + SI+PPP PLL I GI+V+LL +SS++N++SQ+  T INFK F  LLPL+ +FV + I +YGR+VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
               P G+ +LL++L++++SYQ YFHSKW+P IW   YY
Subjt:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

W9RNV3 Uncharacterized protein1.6e-3658.57Show/hide
Query:  MGWLIRE-RRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVY
        MGWLIRE R G +WK GW E+ +AS+T PP PLLAI+GI+V+LLSVSS++N++SQ++ T I F+LF LLLPLV +FV +S+ +YG ++++ PRTK E   
Subjt:  MGWLIRE-RRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVY

Query:  VTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY
        V++   +P GV VLLVVL VLISYQ YF SKW+P IW  Y
Subjt:  VTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein6.2e-0435.04Show/hide
Query:  SITPPPKPLLAILGIL-VILLSVSSFS-NHRSQVKTTGINFKLFFLLLPLVFVF-------VGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLL
        S++P P P+L IL +  V LLS   FS    ++     INF L  LL+PL  +        + N     G        T + P    D  +SP GVA L+
Subjt:  SITPPPKPLLAILGIL-VILLSVSSFS-NHRSQVKTTGINFKLFFLLLPLVFVF-------VGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLL

Query:  VVLLVLISYQPYFHSKW
        V+LLVL+ YQ  F   W
Subjt:  VVLLVLISYQPYFHSKW

AT2G31940.1 unknown protein4.7e-0427.68Show/hide
Query:  PPKPLLAILGILVILL--SVSSFSNHRSQVKTTGINFKLFFLLLPLVFV----FVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLI
        PP PL   + +L++L+  ++S ++++   ++     FKL  +  PL+ +    F+ +     G +  +    + E +Y    T  P GVA +LV L  ++
Subjt:  PPKPLLAILGILVILL--SVSSFSNHRSQVKTTGINFKLFFLLLPLVFV----FVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLI

Query:  SYQPYFHSKWFP
        SYQ  F  +WFP
Subjt:  SYQPYFHSKWFP

AT5G19875.1 unknown protein5.6e-0532.08Show/hide
Query:  PKPLLAILGILV-ILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLISYQPYF
        P P L  L I+V  +LS + + N  S ++ T  + KL F+  PL  + + +     G L    P  + + ++     +SP GVA +LV++L ++SYQ  F
Subjt:  PKPLLAILGILV-ILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLISYQPYF

Query:  HSKWFP
          +WFP
Subjt:  HSKWFP

AT5G42146.1 unknown protein1.3e-2240.74Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRT--KLEPV
        MGW I+ERRG +WK+GW E+ + + + PP  LLA+L I+ +LL +SS+  ++ +V+ T  N KLF L LP++FVFV  S+    RL+  +  +    +  
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRT--KLEPV

Query:  YVTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFP
         +      P GV ++L++LL+L+S Q YFHS W+P
Subjt:  YVTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTTGATAAGAGAGAGAAGAGGGCCAGCATGGAAACAAGGATGGGCGGAGCAGGCCATAGCCTCCATAACTCCACCACCAAAGCCTCTGCTTGCCATACTTGG
AATCTTGGTCATTCTGCTATCTGTGTCATCATTTTCAAACCACAGGTCACAGGTGAAGACAACAGGGATCAACTTTAAGCTCTTCTTCTTGCTCTTACCTCTAGTATTTG
TCTTTGTTGGAAACTCCATTGTTAGATATGGTCGTCTTGTAATCATCACTCCGAGAACAAAGCTCGAGCCGGTTTACGTCACCGACCACACTGCGTCGCCTTTGGGGGTG
GCGGTTTTGCTGGTTGTGTTGTTGGTCTTGATATCTTATCAGCCATACTTTCACTCTAAATGGTTTCCAGCAATATGGAGACCATATTATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTTGATAAGAGAGAGAAGAGGGCCAGCATGGAAACAAGGATGGGCGGAGCAGGCCATAGCCTCCATAACTCCACCACCAAAGCCTCTGCTTGCCATACTTGG
AATCTTGGTCATTCTGCTATCTGTGTCATCATTTTCAAACCACAGGTCACAGGTGAAGACAACAGGGATCAACTTTAAGCTCTTCTTCTTGCTCTTACCTCTAGTATTTG
TCTTTGTTGGAAACTCCATTGTTAGATATGGTCGTCTTGTAATCATCACTCCGAGAACAAAGCTCGAGCCGGTTTACGTCACCGACCACACTGCGTCGCCTTTGGGGGTG
GCGGTTTTGCTGGTTGTGTTGTTGGTCTTGATATCTTATCAGCCATACTTTCACTCTAAATGGTTTCCAGCAATATGGAGACCATATTATTATTAG
Protein sequenceShow/hide protein sequence
MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSNHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGV
AVLLVVLLVLISYQPYFHSKWFPAIWRPYYY