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Carg09414 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09414
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCarg_Chr05:1372761..1373784
RNA-Seq ExpressionCarg09414
SyntenyCarg09414
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598492.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2993.06Show/hide
Query:  RCG---GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        +CG   GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ+
Subjt:  RCG---GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

KAG7029428.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-42100Show/hide
Query:  MRRRWRRCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQIGDNKADNDNT
        MRRRWRRCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQIGDNKADNDNT
Subjt:  MRRRWRRCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQIGDNKADNDNT

XP_022962125.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.8e-2998.48Show/hide
Query:  GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ+
Subjt:  GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

XP_022997035.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]3.1e-2995.52Show/hide
Query:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        GG G GEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ+
Subjt:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

XP_023547122.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]1.1e-2997.01Show/hide
Query:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        GG GAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ+
Subjt:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

TrEMBL top hitse value%identityAlignment
A0A5A7VD05 Auxin-induced protein 15A-like3.5e-2688.41Show/hide
Query:  RCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        +CGG G  EIPVDVPKGHFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGFSH MGLTIPCEEQ+
Subjt:  RCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

A0A6J1GIF7 auxin-responsive protein SAUR50-like6.4e-2879.45Show/hide
Query:  RRWRRCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        ++  +CGGAG G+IPVDVPKGHFVVYV ENRSRYIVP+T L++PEFQILLQLAEEEFGFSHHMGLTIPC+E++
Subjt:  RRWRRCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

A0A6J1HE76 auxin-responsive protein SAUR50-like8.9e-3098.48Show/hide
Query:  GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ+
Subjt:  GAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

A0A6J1K8F3 auxin-responsive protein SAUR50-like1.5e-2995.52Show/hide
Query:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        GG G GEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ+
Subjt:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

A0A6J1KJU9 auxin-responsive protein SAUR50-like2.7e-2676.32Show/hide
Query:  RRWRRCGGA---GAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        ++  +CGGA   G G+IPVDVPKGHFVVYV ENRSRYIVP+T L++PEFQILLQLAEEEFGFSHHMGLTIPC+E++
Subjt:  RRWRRCGGA---GAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.9e-2170.15Show/hide
Query:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        GG     +P+DVPKGHF VYV ENRSRYIVP++ LT PEFQ LLQ AEEEFGF H MGLTIPC+E +
Subjt:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

P0DKL1 Auxin-responsive protein SAUR501.7e-1756.94Show/hide
Query:  RRCGGAGAGE----IPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        ++C   G       +P DVPKGHFVVYV E R+RYIVP++ L  P FQ LLQ +EEEFGF+H MG+ IPC+E
Subjt:  RRCGGAGAGE----IPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

P32295 Indole-3-acetic acid-induced protein ARG73.6e-1254.24Show/hide
Query:  VDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQI
        +D PKG+  VYV EN  R+++P++ L  P FQ LL  AEEEFG+ H M GLTIPC E +
Subjt:  VDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQI

P33082 Auxin-induced protein X152.1e-1252.54Show/hide
Query:  VDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQI
        VD PKG+  VYV E   R+++P++ +  P FQ LL  AEEEFG+ H M GLTIPC E++
Subjt:  VDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQI

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.5e-1871.19Show/hide
Query:  EIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        ++P DVPKGHF VYV  NRSRYIVP++ L   EFQ LL+LAEEEFGF H MGLTIPC+E
Subjt:  EIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family6.8e-2274.14Show/hide
Query:  IPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        +P+DVPKGHFVVYV  NR RY++P++ LT PEFQ+LLQ AEEEFGF H+MGLTIPCEE
Subjt:  IPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

AT1G75580.1 SAUR-like auxin-responsive protein family4.0e-2274.58Show/hide
Query:  PVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        P++VPKGHFVVYV ENR RY+VP++ LT PEFQ+LLQ AEEEFGF H MGLTIPCEE +
Subjt:  PVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

AT2G16580.1 SAUR-like auxin-responsive protein family9.8e-2164.29Show/hide
Query:  RRCGGAGAGEI--PVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        ++ GG G  E+  P+DVPKGHF VYV  NRSRYIVP++ LT+ +FQ LL+ AEEEFGF H MGLTIPC+E
Subjt:  RRCGGAGAGEI--PVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

AT2G21220.1 SAUR-like auxin-responsive protein family1.5e-2173.33Show/hide
Query:  IPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        +PVDVPKGHF VYV E RSRYIVP++ LT P+F+ LLQ AEEEFGF+H MGLTIPCEE +
Subjt:  IPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI

AT4G34760.1 SAUR-like auxin-responsive protein family1.4e-2270.15Show/hide
Query:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI
        GG     +P+DVPKGHF VYV ENRSRYIVP++ LT PEFQ LLQ AEEEFGF H MGLTIPC+E +
Subjt:  GGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCGGCGTTGGCGGCGGTGCGGCGGTGCCGGTGCGGGGGAGATTCCGGTGGATGTGCCGAAGGGGCATTTTGTGGTGTATGTGAGTGAGAATAGGAGCCGCTACAT
CGTGCCGCTCACGGTCTTGACGTCGCCTGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTTGGGTTCAGTCACCATATGGGCCTTACTATCCCTTGCGAGGAAC
AGATTGGAGACAATAAAGCTGACAATGATAATACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGCGGCGTTGGCGGCGGTGCGGCGGTGCCGGTGCGGGGGAGATTCCGGTGGATGTGCCGAAGGGGCATTTTGTGGTGTATGTGAGTGAGAATAGGAGCCGCTACAT
CGTGCCGCTCACGGTCTTGACGTCGCCTGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTTGGGTTCAGTCACCATATGGGCCTTACTATCCCTTGCGAGGAAC
AGATTGGAGACAATAAAGCTGACAATGATAATACTTAG
Protein sequenceShow/hide protein sequence
MRRRWRRCGGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQIGDNKADNDNT