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Carg09418 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09418
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCell growth defect protein
Genome locationCarg_Chr05:1346315..1349340
RNA-Seq ExpressionCarg09418
SyntenyCarg09418
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039632 - Transmembrane protein 42


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598488.1 hypothetical protein SDJN03_08266, partial [Cucurbita argyrosperma subsp. sororia]7.1e-56100Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

XP_022144157.1 uncharacterized protein LOC111013916 [Momordica charantia]5.8e-5088.89Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEG+KGKKGY+WAISAG NAA AAIAAKLFSSTLIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQWFVGA+LI++
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILN+SSIEKKE+KD
Subjt:  GVLILNQSSIEKKESKD

XP_022961823.1 uncharacterized protein LOC111462473 [Cucurbita moschata]9.2e-5699.15Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILI+M
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

XP_022997366.1 uncharacterized protein LOC111492304 [Cucurbita maxima]7.8e-5598.29Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGAILI+M
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

XP_038885716.1 multidrug resistance protein EbrB isoform X2 [Benincasa hispida]5.4e-4888.03Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEG+KG KGY WAI+AGLNAAF+AIAAKLFS TLIRYGLV+AFNLAMWGCYVNSLK LSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGA+LI++
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILN+SSI KKESKD
Subjt:  GVLILNQSSIEKKESKD

TrEMBL top hitse value%identityAlignment
A0A0A0LPF1 Uncharacterized protein7.6e-4890.27Show/hide
Query:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIMGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS TLIRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSF+WFVGA+LI++GVLI
Subjt:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIMGVLI

Query:  LNQSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNQSSIEKKESKD

A0A1S3BB59 multidrug resistance protein EbrB1.3e-4789.38Show/hide
Query:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIMGVLI
        +G KGY+WAISAGLNAA +AIAAKLFS T  RYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGAILI++GVLI
Subjt:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIMGVLI

Query:  LNQSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNQSSIEKKESKD

A0A6J1CSW2 uncharacterized protein LOC1110139162.8e-5088.89Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEG+KGKKGY+WAISAG NAA AAIAAKLFSSTLIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQWFVGA+LI++
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILN+SSIEKKE+KD
Subjt:  GVLILNQSSIEKKESKD

A0A6J1HCY1 uncharacterized protein LOC1114624734.5e-5699.15Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILI+M
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

A0A6J1K7A2 uncharacterized protein LOC1114923043.8e-5598.29Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGAILI+M
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30845.1 unknown protein1.1e-3565.77Show/hide
Query:  KKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIMGVLILN
        ++GY+ A++AGLNAA AAI+AK F+S +I+YGLV+  N+ MW CYVNSL+ALSSLQAT TNF+ANFL SGLAG FLF+E LSF+WF GA+ I  GVLIL+
Subjt:  KKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIMGVLILN

Query:  QSSIEKKESKD
        +SS++KK S D
Subjt:  QSSIEKKESKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGAGAAAGGGGAAGAAGGGTTACATGTGGGCAATTTCAGCTGGTCTCAACGCTGCGTTCGCCGCCATTGCCGCCAAGCTTTTCTCCTCTACGTTAATTAGGTA
TGGACTGGTAATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAACAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACCAACTTTTCAGCTAACTTTCTTT
GTTCTGGTCTAGCCGGTTTCTTCTTGTTCGAAGAACCATTATCATTTCAGTGGTTCGTAGGTGCCATATTGATCATAATGGGCGTGCTGATATTGAATCAGTCGAGCATT
GAGAAGAAGGAATCAAAGGACTGA
mRNA sequenceShow/hide mRNA sequence
AAGCCGGTTGGCATCCCGACCGCGATCAGTCCAAGCCGGGTTCGCCACGTATGGAGGTTTTCGTCTTCTTGCCTACCGCACAACTCAGAGAGGAGAATTTTGAACCCTGC
AATGGAAGGGAGAAAGGGGAAGAAGGGTTACATGTGGGCAATTTCAGCTGGTCTCAACGCTGCGTTCGCCGCCATTGCCGCCAAGCTTTTCTCCTCTACGTTAATTAGGT
ATGGACTGGTAATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAACAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACCAACTTTTCAGCTAACTTTCTT
TGTTCTGGTCTAGCCGGTTTCTTCTTGTTCGAAGAACCATTATCATTTCAGTGGTTCGTAGGTGCCATATTGATCATAATGGGCGTGCTGATATTGAATCAGTCGAGCAT
TGAGAAGAAGGAATCAAAGGACTGACCTCTGCTCTTAATTTGTCATCAAATATTTGAAAACGTGAAATGCAAACTCTATTTTCATTGAATCTCTTGTTTGCAAATTTTTG
TTTACATATTTCTTACCCGTGTTCGACAAACTTTGGTACATGTACGTGGGTTTTTTGCTTCGATCAAGGTCGAGATTGAAGCTACACAGGGCCTGCATTTTCAGCC
Protein sequenceShow/hide protein sequence
MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIIMGVLILNQSSI
EKKESKD