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Carg09435 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09435
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHTH myb-type domain-containing protein
Genome locationCarg_Chr17:6085783..6088105
RNA-Seq ExpressionCarg09435
SyntenyCarg09435
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059406.1 uncharacterized protein E6C27_scaffold242G001320 [Cucumis melo var. makuwa]6.1e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

KAG7013992.1 hypothetical protein SDJN02_24162, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-29100Show/hide
Query:  MTKTILSDGDRKGSDEHDKFSETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHER
        MTKTILSDGDRKGSDEHDKFSETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHER
Subjt:  MTKTILSDGDRKGSDEHDKFSETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHER

XP_008462318.2 PREDICTED: uncharacterized protein LOC103500701 isoform X1 [Cucumis melo]6.1e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

XP_008462322.2 PREDICTED: uncharacterized protein LOC103500701 isoform X3 [Cucumis melo]6.1e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

XP_016902835.1 PREDICTED: uncharacterized protein LOC103500701 isoform X4 [Cucumis melo]6.1e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

TrEMBL top hitse value%identityAlignment
A0A1S3CGM9 uncharacterized protein LOC103500701 isoform X33.0e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

A0A1S3CGR3 uncharacterized protein LOC103500701 isoform X23.0e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

A0A1S3CI77 uncharacterized protein LOC103500701 isoform X13.0e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

A0A1S4E4D2 uncharacterized protein LOC103500701 isoform X43.0e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

A0A5D3BW39 HTH myb-type domain-containing protein3.0e-0766.67Show/hide
Query:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE
        S    SISIP+ IL RVREL E+HAQIPP +H QGKLG G  G SMHE
Subjt:  SETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAAACCATCCTTAGTGACGGAGACAGGAAAGGTTCTGATGAGCATGATAAGTTCTCGGAAACATCCCCATCGATATCGATTCCTTCATCGATCTTGTCACGGGT
GAGGGAGCTTGATGAGATACATGCTCAAATTCCTCCTCCAAATCACAGCCAGGGCAAGTTGGGTGCAGGAGTTAGTGGGAGAAGTATGCATGAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAAACCATCCTTAGTGACGGAGACAGGAAAGGTTCTGATGAGCATGATAAGTTCTCGGAAACATCCCCATCGATATCGATTCCTTCATCGATCTTGTCACGGGT
GAGGGAGCTTGATGAGATACATGCTCAAATTCCTCCTCCAAATCACAGCCAGGGCAAGTTGGGTGCAGGAGTTAGTGGGAGAAGTATGCATGAGAGATGA
Protein sequenceShow/hide protein sequence
MTKTILSDGDRKGSDEHDKFSETSPSISIPSSILSRVRELDEIHAQIPPPNHSQGKLGAGVSGRSMHER