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Carg09475 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09475
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRWD domain-containing protein
Genome locationCarg_Chr17:6358578..6362297
RNA-Seq ExpressionCarg09475
SyntenyCarg09475
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005844 - polysome (cellular component)
InterPro domainsIPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR040213 - GIR2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059445.1 RWD domain-containing protein 1 isoform X1 [Cucumis melo var. makuwa]3.2e-1673.61Show/hide
Query:  DARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        +ARKR   NPITAAMTDYAQEQEMEI+ALEAILMDEFK          EIHSSESGLNT GRCF ITLS Q+
Subjt:  DARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
KAG7014030.1 hypothetical protein SDJN02_24201, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-41100Show/hide
Query:  MFMGFSLKKLSSHHSDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQEMQ
        MFMGFSLKKLSSHHSDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQEMQ
Subjt:  MFMGFSLKKLSSHHSDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQEMQ
XP_008462371.1 PREDICTED: RWD domain-containing protein 1 isoform X1 [Cucumis melo]4.0e-1174.14Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MTDYAQEQEMEI+ALEAILMDEFK          EIHSSESGLNT GRCF ITLS Q+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
XP_022992365.1 RWD domain-containing protein 1-like isoform X2 [Cucurbita maxima]1.3e-1279.31Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MTDYAQEQEMEIDALEAILMDEFK          EIHSSESGLNT GRCFLITLS QE
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
XP_023547866.1 RWD domain-containing protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]8.1e-1277.59Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MTDYAQEQEMEIDALEAIL DEFK          EIHSSESGLNT GRCFLITLS QE
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
TrEMBL top hitse value%identityAlignment
A0A1S3CGU4 RWD domain-containing protein 1 isoform X12.0e-1174.14Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MTDYAQEQEMEI+ALEAILMDEFK          EIHSSESGLNT GRCF ITLS Q+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
A0A5A7V0T4 RWD domain-containing protein 1 isoform X11.5e-1673.61Show/hide
Query:  DARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        +ARKR   NPITAAMTDYAQEQEMEI+ALEAILMDEFK          EIHSSESGLNT GRCF ITLS Q+
Subjt:  DARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
A0A6J1HJY5 RWD domain-containing protein 1-like2.6e-1174.14Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MTDYAQEQEMEI+ALEAILMDEFK          EIHSSESGLNT GRCF ITLS Q+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
A0A6J1JVI2 RWD domain-containing protein 1-like isoform X26.1e-1379.31Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MTDYAQEQEMEIDALEAILMDEFK          EIHSSESGLNT GRCFLITLS QE
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
A0A6J1KDI4 RWD domain-containing protein 1-like2.6e-1174.14Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MTDYAQEQEMEI+ALEAILMDEFK          EIHSSESGLNT GRCF ITLS Q+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G51730.1 Ubiquitin-conjugating enzyme family protein1.0e-1265.52Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE
        MT+Y QEQEMEI+ALEAILMDEFK          EIHSSESGLNT  RCF IT++ Q+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATGGGGTTTTCTCTGAAGAAGCTTTCATCGCATCATAGCGACGCCAGGAAGAGGAGTACGTCGAATCCAATTACAGCAGCCATGACTGACTATGCACAGGAGCA
GGAGATGGAAATTGACGCATTGGAAGCTATACTTATGGATGAGTTCAAAGATACCCTCTTTTATCTGTATTCCATATCAGAAATTCACTCAAGTGAGAGTGGCCTTAACA
CTTGTGGTAGATGCTTTCTGATAACACTATCTCACCAAGAAATGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTATGGGGTTTTCTCTGAAGAAGCTTTCATCGCATCATAGCGACGCCAGGAAGAGGAGTACGTCGAATCCAATTACAGCAGCCATGACTGACTATGCACAGGAGCA
GGAGATGGAAATTGACGCATTGGAAGCTATACTTATGGATGAGTTCAAAGATACCCTCTTTTATCTGTATTCCATATCAGAAATTCACTCAAGTGAGAGTGGCCTTAACA
CTTGTGGTAGATGCTTTCTGATAACACTATCTCACCAAGAAATGCAGTGA
Protein sequenceShow/hide protein sequence
MFMGFSLKKLSSHHSDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKDTLFYLYSISEIHSSESGLNTCGRCFLITLSHQEMQ