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Carg09488 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09488
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionclavaminate synthase-like protein At3g21360
Genome locationCarg_Chr17:6470111..6474049
RNA-Seq ExpressionCarg09488
SyntenyCarg09488
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR042098 - Taurine dioxygenase TauD-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141667.1 clavaminate synthase-like protein At3g21360 [Cucumis sativus]5.1e-1864.63Show/hide
Query:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        A+LFR F +EAASDFN+VVEAF  +EFPYVGG A R+KVVGRVFTAN SPPD++IPFHHELAQ+          CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
XP_008462414.1 PREDICTED: clavaminate synthase-like protein At3g21360 [Cucumis melo]3.0e-1864.63Show/hide
Query:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        A+LFR F +EAASDFN+VVEAF  +EFPYVGG A R+KVVGRVFTAN SPPD++IPFHHELAQ++         CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
XP_022964464.1 clavaminate synthase-like protein At3g21360 [Cucurbita moschata]6.6e-1863.41Show/hide
Query:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        AVLFR F ++AASDFN+VVE+  F+EFPYVGG A RT+VVGRVFTAN SPPD++IPFHHELAQ+          CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
XP_023000372.1 clavaminate synthase-like protein At3g21360 [Cucurbita maxima]3.0e-1863.41Show/hide
Query:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        AVLFR F ++AASDFN+VVE+  F+EFPYVGG A RT+VVGRVFTAN SPPD++IPFHHELAQ+          CE   +SG
Subjt:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
XP_038899975.1 clavaminate synthase-like protein At3g21360 [Benincasa hispida]1.0e-1867.07Show/hide
Query:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        AVLFR F +EAASDFN+VVEAF  +EFPYVGG A RTKVVGRVFTAN SPPD++IPFHHELAQ+          CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
TrEMBL top hitse value%identityAlignment
A0A0A0K9R6 TauD domain-containing protein2.4e-1864.63Show/hide
Query:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        A+LFR F +EAASDFN+VVEAF  +EFPYVGG A R+KVVGRVFTAN SPPD++IPFHHELAQ+          CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
A0A1S3CGV9 clavaminate synthase-like protein At3g213601.4e-1864.63Show/hide
Query:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        A+LFR F +EAASDFN+VVEAF  +EFPYVGG A R+KVVGRVFTAN SPPD++IPFHHELAQ++         CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
A0A5A7V0W2 Clavaminate synthase-like protein1.4e-1864.63Show/hide
Query:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        A+LFR F +EAASDFN+VVEAF  +EFPYVGG A R+KVVGRVFTAN SPPD++IPFHHELAQ++         CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEAF--DEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
A0A6J1HN97 clavaminate synthase-like protein At3g213603.2e-1863.41Show/hide
Query:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        AVLFR F ++AASDFN+VVE+  F+EFPYVGG A RT+VVGRVFTAN SPPD++IPFHHELAQ+          CE    SG
Subjt:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
A0A6J1KDG9 clavaminate synthase-like protein At3g213601.4e-1863.41Show/hide
Query:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
        AVLFR F ++AASDFN+VVE+  F+EFPYVGG A RT+VVGRVFTAN SPPD++IPFHHELAQ+          CE   +SG
Subjt:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSG
SwissProt top hitse value%identityAlignment
Q9LIG0 Clavaminate synthase-like protein At3g213606.2e-1971.88Show/hide
Query:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQL
        AVLFR F + +A DFN+VVEA  FDE PYVGG A RT VVGRVFTAN SPPD++IPFHHE+AQ+
Subjt:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQL
Arabidopsis top hitse value%identityAlignment
AT3G21360.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein4.4e-2071.88Show/hide
Query:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQL
        AVLFR F + +A DFN+VVEA  FDE PYVGG A RT VVGRVFTAN SPPD++IPFHHE+AQ+
Subjt:  AVLFRVFLIEAASDFNNVVEA--FDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCCCTCCACCGCGTAGAACCACACGACGTCCTCAACTGGCGCGTCAAGAACAAGCGCCACCAGCAGTACTTTTCAGAGTTTTTCTGATAGAAGCGGCATCCGA
CTTCAACAACGTCGTGGAGGCCTTTGATGAGTTTCCGTACGTCGGAGGCGTAGCTTCTCGAACCAAGGTCGTTGGTCGGGTTTTCACGGCCAACGGATCACCGCCGGACC
GGCAGATCCCTTTTCACCACGAATTGGCCCAGCTAACACCGGCTAGGAAGATGCGAGGAATGTCCTGTGAAGGCCGTAACGTTTCGGGACGGTACGCCATTGCCAGCGGA
TATCATCAATGGCTGCTTGAGAATTCTGGAACAGGAGTCTCTTTCCATTCCCTGGCAGGAAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTCCCTCCACCGCGTAGAACCACACGACGTCCTCAACTGGCGCGTCAAGAACAAGCGCCACCAGCAGTACTTTTCAGAGTTTTTCTGATAGAAGCGGCATCCGA
CTTCAACAACGTCGTGGAGGCCTTTGATGAGTTTCCGTACGTCGGAGGCGTAGCTTCTCGAACCAAGGTCGTTGGTCGGGTTTTCACGGCCAACGGATCACCGCCGGACC
GGCAGATCCCTTTTCACCACGAATTGGCCCAGCTAACACCGGCTAGGAAGATGCGAGGAATGTCCTGTGAAGGCCGTAACGTTTCGGGACGGTACGCCATTGCCAGCGGA
TATCATCAATGGCTGCTTGAGAATTCTGGAACAGGAGTCTCTTTCCATTCCCTGGCAGGAAGGGGATGAAATAAAGCTCGTCTCGTTGTTCAAGCCTTAGCCTAAAGCGC
GTCGAGGTGAATGTCGAACATTGTCAAAGGCTGACCCCTGCCAAATATGATCTTGACCATCTGGGCGACTTGATTAGAAAACAATAAGGTAAATGCAAGCTCACACGGTA
CAAATCGTTAAATACTGTAGGAAAGCTTTATTTTGGATACCGACTAGAGCTTTCTTCAAACAAGCTCTAACACACATTTCCTTAAAACAATGCGATCTTAAGTAAGCTTA
CTCTAATCCAAATTCAAACGGAATACTAACTTAAACTTTGATGGGTACGTGGTCGTGGACAAATACAAACCAATTAGGGCTACCTTTGAACGCCTCAAATTGCACGTCAA
CCACGTGAACATTTCTTTTCCAACAAAACGTTATTATGGTTGAAAATGGAAACTTAAATAGATGAACTATGATTACAAGTTAGAAGAAGATTATTGAAGGCAGCATCAAG
TCTTGGCTGAGATCACATATTCTGCAACAGCTTTGACAAAGGATTTTTTAACCCATTCCACATCCTTTTGTCAAATTTAATGATAACAGATTGAAATTTTTTTTGGGTTT
CTTTTTATGGTTTGATTCCCACTCTATGCCCATAACACACTGCATTTTCCAACTATGCTCTCCTTTCTTCCATTCTCATGACTTTGAAGAGCGTCGGTGAAGAGCGTCGG
TTTGGTCCGACCACTAGCACTTTTTTTTTTTTTTTTTTTTTTTTTCTAATGATCGTCGGAAGAGTTGTCTTTTTTAACAAATGTGAAAGTGAA
Protein sequenceShow/hide protein sequence
MHFPPPRRTTRRPQLARQEQAPPAVLFRVFLIEAASDFNNVVEAFDEFPYVGGVASRTKVVGRVFTANGSPPDRQIPFHHELAQLTPARKMRGMSCEGRNVSGRYAIASG
YHQWLLENSGTGVSFHSLAGRG