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Carg09490 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09490
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:6479987..6486811
RNA-Seq ExpressionCarg09490
SyntenyCarg09490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014044.1 hypothetical protein SDJN02_24216, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-119100Show/hide
Query:  MPSRHDSTTIHIRDWSTEIPTKSSKRGKKLSNTWLQEATDAFADLLSLGDRHFEEAEFNKERNSRGMEKKQKVKYGNLRARSRALNGFSASILSPTPYGK
        MPSRHDSTTIHIRDWSTEIPTKSSKRGKKLSNTWLQEATDAFADLLSLGDRHFEEAEFNKERNSRGMEKKQKVKYGNLRARSRALNGFSASILSPTPYGK
Subjt:  MPSRHDSTTIHIRDWSTEIPTKSSKRGKKLSNTWLQEATDAFADLLSLGDRHFEEAEFNKERNSRGMEKKQKVKYGNLRARSRALNGFSASILSPTPYGK

Query:  ILRLARYRGCKEIIEESLLHPPFHEWKRTLGQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRPDIRNQYFSRIEDSIHKIITL
        ILRLARYRGCKEIIEESLLHPPFHEWKRTLGQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRPDIRNQYFSRIEDSIHKIITL
Subjt:  ILRLARYRGCKEIIEESLLHPPFHEWKRTLGQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRPDIRNQYFSRIEDSIHKIITL

Query:  DNSDKLIDTNSKQKVK
        DNSDKLIDTNSKQKVK
Subjt:  DNSDKLIDTNSKQKVK
TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]1.9e-0640Show/hide
Query:  LARYRGCKEIIEESLLHPPFHEWKRTL-------------GQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRP
        +A  R  + + E  +LHPPF E  R L             G+R  R FRG +R  S++ + + F VSLWTS +K  CNYSLG I L   P
Subjt:  LARYRGCKEIIEESLLHPPFHEWKRTL-------------GQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRP
TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909769.6e-0436.78Show/hide
Query:  LRLARYRGCKEIIEESLLHPPFHEWKRTL-------------GQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLIL
        L  AR+R  + +IEE LL+ P  E  R L              +   R F G+ER   ++W  I + VSLW S +K+ CNY L +IL
Subjt:  LRLARYRGCKEIIEESLLHPPFHEWKRTL-------------GQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLIL
A0A5D3D7T2 Uncharacterized protein9.3e-0740Show/hide
Query:  LARYRGCKEIIEESLLHPPFHEWKRTL-------------GQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRP
        +A  R  + + E  +LHPPF E  R L             G+R  R FRG +R  S++ + + F VSLWTS +K  CNYSLG I L   P
Subjt:  LARYRGCKEIIEESLLHPPFHEWKRTL-------------GQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCAAGGCATGATTCCACAACGATCCACATTCGAGACTGGTCCACTGAAATCCCCACAAAATCCAGCAAACGAGGGAAGAAACTTTCAAACACATGGTTGCAGGA
AGCAACAGATGCATTTGCTGACTTACTTAGTTTAGGCGACAGACATTTTGAAGAAGCTGAGTTTAACAAGGAAAGAAACAGTCGAGGAATGGAGAAGAAACAAAAAGTGA
AGTACGGAAATTTAAGGGCTCGTAGCAGAGCGCTAAATGGTTTTAGCGCTTCCATCTTGAGTCCAACTCCTTATGGCAAAATTTTGAGACTGGCTAGATATAGAGGTTGC
AAAGAGATAATCGAGGAGTCCCTTCTCCACCCTCCTTTTCATGAATGGAAGAGAACTTTGGGGCAGAGGACTAGTAGAGATTTTAGAGGGCTCGAGAGATCTTGGAGTGA
TGTTTGGGCTTTTATTACGTTCAAGGTTTCTCTATGGACTTCGACAACTAAGTCACTTTGTAATTACTCGTTAGGTCTTATTTTGCTTGATCGGAGGCCCGATATAAGAA
ATCAGTATTTCTCAAGGATTGAAGATTCCATACACAAGATCATCACCCTGGATAACAGTGACAAACTCATTGATACTAACTCCAAACAAAAGGTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCAAGGCATGATTCCACAACGATCCACATTCGAGACTGGTCCACTGAAATCCCCACAAAATCCAGCAAACGAGGGAAGAAACTTTCAAACACATGGTTGCAGGA
AGCAACAGATGCATTTGCTGACTTACTTAGTTTAGGCGACAGACATTTTGAAGAAGCTGAGTTTAACAAGGAAAGAAACAGTCGAGGAATGGAGAAGAAACAAAAAGTGA
AGTACGGAAATTTAAGGGCTCGTAGCAGAGCGCTAAATGGTTTTAGCGCTTCCATCTTGAGTCCAACTCCTTATGGCAAAATTTTGAGACTGGCTAGATATAGAGGTTGC
AAAGAGATAATCGAGGAGTCCCTTCTCCACCCTCCTTTTCATGAATGGAAGAGAACTTTGGGGCAGAGGACTAGTAGAGATTTTAGAGGGCTCGAGAGATCTTGGAGTGA
TGTTTGGGCTTTTATTACGTTCAAGGTTTCTCTATGGACTTCGACAACTAAGTCACTTTGTAATTACTCGTTAGGTCTTATTTTGCTTGATCGGAGGCCCGATATAAGAA
ATCAGTATTTCTCAAGGATTGAAGATTCCATACACAAGATCATCACCCTGGATAACAGTGACAAACTCATTGATACTAACTCCAAACAAAAGGTCAAGTAA
Protein sequenceShow/hide protein sequence
MPSRHDSTTIHIRDWSTEIPTKSSKRGKKLSNTWLQEATDAFADLLSLGDRHFEEAEFNKERNSRGMEKKQKVKYGNLRARSRALNGFSASILSPTPYGKILRLARYRGC
KEIIEESLLHPPFHEWKRTLGQRTSRDFRGLERSWSDVWAFITFKVSLWTSTTKSLCNYSLGLILLDRRPDIRNQYFSRIEDSIHKIITLDNSDKLIDTNSKQKVK