; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09522 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09522
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDynein light chain
Genome locationCarg_Chr17:6638304..6638909
RNA-Seq ExpressionCarg09522
SyntenyCarg09522
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0005085 - guanyl-nucleotide exchange factor activity (molecular function)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575532.1 hypothetical protein SDJN03_26171, partial [Cucurbita argyrosperma subsp. sororia]6.8e-3485.71Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

XP_011659570.1 dynein light chain LC6, flagellar outer arm [Cucumis sativus]1.4e-3180.22Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

XP_022953777.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]2.0e-3385.56Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

XP_022992454.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima]5.8e-3383.52Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKALVQDTDMPGKMQIQAMDAAS+ALDRYD             DFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

XP_038897874.1 dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]8.3e-3280.22Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKAL+QDTDMPGKMQIQAMDAAS+ALD YD             DFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

TrEMBL top hitse value%identityAlignment
A0A0A0K947 Dynein light chain6.9e-3280.22Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

A0A1S3CGU5 Dynein light chain6.9e-3280.22Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

A0A5A7UW48 Dynein light chain6.9e-3280.22Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKALVQDTDMPGKMQIQAMDAAS+ALD YD             DFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG+
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

A0A6J1GP96 Dynein light chain9.6e-3485.56Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD             DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

A0A6J1JVQ9 Dynein light chain2.8e-3383.52Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
        MLEGKALVQDTDMPGKMQIQAMDAAS+ALDRYD             DFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm3.8e-1140.23Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M E KA++++ DMP  MQ  A+D A+QAL++++           +FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

O96860 Dynein light chain 2, cytoplasmic1.1e-1039.08Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  A+D A+QAL++Y+           +FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Q22799 Dynein light chain 1, cytoplasmic6.5e-1139.08Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M++ KA++++ DM   MQ  A+D A+QAL++Y+           +FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Q24117 Dynein light chain 1, cytoplasmic1.1e-1039.08Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  A+D A+QAL++Y+           +FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Q3MHR3 Dynein light chain 2, cytoplasmic3.2e-1037.93Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM   MQ  A+D A+QA+++Y+           +FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-----------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 113.5e-1259.32Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCV
        MLEGKA+V+D+DMP KMQ+QAM  ASQALD +D             +FD+RYGSGWQCV
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.1e-2970Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKA+V+D+DMP KMQ+QAM  ASQALD +D             +FD+RYGSGWQCVVGSNFGCFFTHSKG+FIYF+LETL FLIFKG
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

AT3G16120.1 Dynein light chain type 1 family protein2.1e-2867.78Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKA V++TDMP KMQ+QAM  ASQ+LD +D             +FD+RYGSGWQCVVG+NFGCFFTHSKG+FIYF L TLNFLIFKG
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

AT4G27360.1 Dynein light chain type 1 family protein8.1e-1747.78Show/hide
Query:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKA++ DTDM   M+  A+  AS+ALD +D             +FD  YGSGWQC+VG++FG F TH  G FI+F + +L  L+FKG
Subjt:  MLEGKALVQDTDMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

AT5G20110.1 Dynein light chain type 1 family protein3.9e-1143.59Show/hide
Query:  DMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        DMPG MQ  A   A   LD  +             +FD  YG  W C+VGS+FG F THS G FIYF ++ L  L+FK
Subjt:  DMPGKMQIQAMDAASQALDRYD-------------DFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTGGAAGAAGAAGGCATTTCAGATTGATATAATCATCTTGTCGAGCAAATCCCCACCAGTTCTGTCTTTTCAGGAAAGGATGTTGGAAGGCAAAGCTTTGGTACAGGA
TACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGG
TGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGATTTGA
mRNA sequenceShow/hide mRNA sequence
TCTTGGAAGAAGAAGGCATTTCAGATTGATATAATCATCTTGTCGAGCAAATCCCCACCAGTTCTGTCTTTTCAGGAAAGGATGTTGGAAGGCAAAGCTTTGGTACAGGA
TACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTCTCAAGCTCTGGATCGCTATGATGATTTTGACGACAGATATGGAAGCGGATGGCAATGTGTGG
TGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAAGGCTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGATTTGA
Protein sequenceShow/hide protein sequence
SWKKKAFQIDIIILSSKSPPVLSFQERMLEGKALVQDTDMPGKMQIQAMDAASQALDRYDDFDDRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGI