; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09536 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09536
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRegulator of telomere elongation helicase 1 homolog
Genome locationCarg_Chr17:6703749..6707174
RNA-Seq ExpressionCarg09536
SyntenyCarg09536
Gene Ontology termsGO:0009555 - pollen development (biological process)
GO:0010569 - regulation of double-strand break repair via homologous recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0036297 - interstrand cross-link repair (biological process)
GO:0043007 - maintenance of rDNA (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0048364 - root development (biological process)
GO:0070716 - mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication (biological process)
GO:0090657 - telomeric loop disassembly (biological process)
GO:1904430 - negative regulation of t-circle formation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0070182 - DNA polymerase binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR045028 - Helicase superfamily 1/2, DinG/Rad3-like
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR014013 - Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
IPR010614 - DEAD2
IPR006554 - Helicase-like, DEXD box c2 type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575543.1 Regulator of telomere elongation helicase 1-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.9e-109100Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

KAG7014089.1 Regulator of telomere elongation helicase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-160100Show/hide
Query:  MPESTKRKCQIYSSINQETLNQIQYQRRETNLQSNPGKRSQIEFLGSGSLHKTALTHEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGID
        MPESTKRKCQIYSSINQETLNQIQYQRRETNLQSNPGKRSQIEFLGSGSLHKTALTHEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGID
Subjt:  MPESTKRKCQIYSSINQETLNQIQYQRRETNLQSNPGKRSQIEFLGSGSLHKTALTHEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGID

Query:  VDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTRTHSQLRQV
        VDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTRTHSQLRQV
Subjt:  VDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTRTHSQLRQV

Query:  IQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        IQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
Subjt:  IQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

XP_022954227.1 regulator of telomere elongation helicase 1 homolog isoform X1 [Cucurbita moschata]7.9e-109100Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

XP_022992069.1 regulator of telomere elongation helicase 1 homolog isoform X1 [Cucurbita maxima]3.0e-10899.49Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFT VSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

XP_023549193.1 regulator of telomere elongation helicase 1 homolog isoform X1 [Cucurbita pepo subsp. pepo]7.9e-109100Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

TrEMBL top hitse value%identityAlignment
A0A0A0K6J7 Helicase ATP-binding domain-containing protein2.4e-9589.85Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRY IRGIDVDFPFDAYDCQLVYMEKVIQSLQ KCNALLESPTGTGKTLCLLCATLAWRKSLG+FSSGRSV NSQN EG  NV SSQSTS + PTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIH++VSLLRGRTQNNACRSLCRK G RHC H+ RVSGYVK+NPHLGDEPIDIEDLV IGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

A0A1S3CHR9 regulator of telomere elongation helicase 1 isoform X12.7e-9488.83Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRY IRGI VDFP+DAYDCQLVYMEKVIQSLQ KCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSG+SV NSQN EG +NVSSSQSTS + PTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIH+EVSLLRG+TQNNACRSLCRK G RHC H+ RVSGYVK+N HLGDEPIDIEDLV IGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

A0A6J1D6Q1 DNA helicase6.6e-10192.89Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQ  CNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRS WNSQN EG +NVS+SQSTST+P TIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRG RHCNH+T VSGY+K+NPHLGDEPIDIEDLVNIGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

A0A6J1GQH0 regulator of telomere elongation helicase 1 homolog isoform X13.8e-109100Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

A0A6J1JWK2 regulator of telomere elongation helicase 1 homolog isoform X11.5e-10899.49Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
        MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYT

Query:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFT VSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
Subjt:  TRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

SwissProt top hitse value%identityAlignment
A0A0P0V4R0 Regulator of telomere elongation helicase 1 homolog2.2e-6158.22Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDF----------SSGRSVWNSQNTEGGMNVSSSQ--
        MP Y+IRG+DVDFP+DAYDCQ+ YM++V++SLQ   NALLESPTGTGKTLCLLC+ LAWR++ G+F            G     SQ    G   S SQ  
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDF----------SSGRSVWNSQNTEGGMNVSSSQ--

Query:  ----STSTRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPID
            S S+R P I+Y +RTHSQLRQVI+ELK TSYRPKM VLGSREQ+CIH+EVS LRGR QNNAC  LC+K   R C H   V+ ++++N  LG E  D
Subjt:  ----STSTRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPID

Query:  IEDLVNIGKSFGP
        IEDLVNIG++ GP
Subjt:  IEDLVNIGKSFGP

A4K436 Regulator of telomere elongation helicase 19.9e-3844.98Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSV----------------WNSQNTEGGMNV
        MP+  ++G+ VDFPF  Y CQ  YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR+ L D  S R +                W +   EG +  
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSV----------------WNSQNTEGGMNV

Query:  SSSQSTSTRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKR-GNRHCNHFTRVSGYVKDNPHLGDEPI
            +  T  P I+Y +RTHSQL QVI EL+ TSYRP++ VLGSREQLCIH EV   + +  N+    LCR++  +R C+ +  V     +   L    +
Subjt:  SSSQSTSTRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKR-GNRHCNHFTRVSGYVKDNPHLGDEPI

Query:  DIEDLVNIG
        DIEDLV  G
Subjt:  DIEDLVNIG

F4HQE2 Regulator of telomere elongation helicase 1 homolog6.8e-7158.3Show/hide
Query:  THEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGD
        T  +  +  + F + L+ +   F   S E + +  MP Y IRGI+V+FPF+AY  Q++YM++VI+SLQ KC+ALLESPTGTGKTLCLLCATLAWRKSLG 
Subjt:  THEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGD

Query:  FSSGRSVWNSQNTEGGMNVSSSQSTSTRP---PTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHC
        FS+ +   NS       +   SQS        PTIVY +RTHSQLRQVI+ELK++SYRPKMVVLGSREQLC+++EV+ LRG+   NAC+ LC+KRG R C
Subjt:  FSSGRSVWNSQNTEGGMNVSSSQSTSTRP---PTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHC

Query:  NHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        NHF R+  Y+K NPH+GDEP+DIEDLVNIGK  GP
Subjt:  NHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP

Q0VGM9 Regulator of telomere elongation helicase 17.6e-3845.89Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQST----------
        MPR  + G+ VDFPF  Y CQ  YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW++ L D  S   +  ++  +G +  S + S+          
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQST----------

Query:  ----STRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKR-GNRHCNHFTRVSGYVKDNPHLGDEPIDI
             T  P I+Y +RTHSQL QVI+EL+ T+YRPK+ VLGSREQLCIH EV   + +  N+   SLCRK+  +R C+ +  V     +   L    +DI
Subjt:  ----STRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKR-GNRHCNHFTRVSGYVKDNPHLGDEPIDI

Query:  EDLVNIG
        EDLV  G
Subjt:  EDLVNIG

Q5RJZ1 Regulator of telomere elongation helicase 15.8e-3846.86Show/hide
Query:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQST----------
        MPR  + G+ VDFPF  Y CQ  YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR+ L D  S   +  ++  +G +  S + S+          
Subjt:  MPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQST----------

Query:  ----STRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKR-GNRHCNHFTRVSGYVKDNPHLGDEPIDI
             T  P I+Y +RTHSQL QVI EL+ TSYRPK+ VLGSREQLCIH EV   + +  N+   SLCRK+  +R C+ +  V     +   L    +DI
Subjt:  ----STRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKR-GNRHCNHFTRVSGYVKDNPHLGDEPIDI

Query:  EDLVNIG
        EDLV  G
Subjt:  EDLVNIG

Arabidopsis top hitse value%identityAlignment
AT1G03190.1 RAD3-like DNA-binding helicase protein1.3e-0830.3Show/hide
Query:  YKIRGIDVDFPFD-AYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTR
        +KI  + V FP+D  Y  Q  YM ++ ++L  K + LLE PTGTGKT+ LL    ++R S  D                            P  +VY TR
Subjt:  YKIRGIDVDFPFD-AYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTR

Query:  THSQLRQVIQELK--------KTSYRPKMVVLG--SREQLCIHDEVSLLRGRTQNNACRSLCRKR
        T  ++ + + ELK            + K++ LG  SR+ LC++ +V     R   +A    CRKR
Subjt:  THSQLRQVIQELK--------KTSYRPKMVVLG--SREQLCIHDEVSLLRGRTQNNACRSLCRKR

AT1G03190.2 RAD3-like DNA-binding helicase protein1.3e-0830.3Show/hide
Query:  YKIRGIDVDFPFD-AYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTR
        +KI  + V FP+D  Y  Q  YM ++ ++L  K + LLE PTGTGKT+ LL    ++R S  D                            P  +VY TR
Subjt:  YKIRGIDVDFPFD-AYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTR

Query:  THSQLRQVIQELK--------KTSYRPKMVVLG--SREQLCIHDEVSLLRGRTQNNACRSLCRKR
        T  ++ + + ELK            + K++ LG  SR+ LC++ +V     R   +A    CRKR
Subjt:  THSQLRQVIQELK--------KTSYRPKMVVLG--SREQLCIHDEVSLLRGRTQNNACRSLCRKR

AT1G20720.1 RAD3-like DNA-binding helicase protein1.1e-2835.56Show/hide
Query:  YKIRGIDVDFPFDAYDCQLVYMEKVIQSL-----QGKCNALLESPTGTGKTLCLLCATLAWRKSL------GDFSSGRSV-----------------WNS
        Y+I G+ V+FP+  Y  QL +M +VI +L      G C+ALLESPTGTGK+L LLC+ LAW+++       G+ S  ++                     
Subjt:  YKIRGIDVDFPFDAYDCQLVYMEKVIQSL-----QGKCNALLESPTGTGKTLCLLCATLAWRKSL------GDFSSGRSV-----------------WNS

Query:  QNTEGGMNVSSSQSTS---TRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHF---TRVS
         +T    NV  +++ +   T+ PTI Y +RTHSQ+ QVI+E +KT YR  M VL SR+  C +  V  L     ++ CR L + + N  C+ F    +++
Subjt:  QNTEGGMNVSSSQSTS---TRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHF---TRVS

Query:  GYVKDNPHLGDEPIDIEDLVNIGKS
         +    P   +E  DIEDLV +GK+
Subjt:  GYVKDNPHLGDEPIDIEDLVNIGKS

AT1G20750.1 RAD3-like DNA-binding helicase protein5.6e-2840.59Show/hide
Query:  YKIRGIDVDFPFDAYDCQLVYMEKVIQSL-----QGKCNALLESPTGTGKTLCLLCATLAWRKSL-GDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTI
        Y+I G+ V+FP+  Y  QL +M +VI +L      G  +ALLESPTGTGK+L LLC+ LAW+KS    F +G    +          S+ +    + PTI
Subjt:  YKIRGIDVDFPFDAYDCQLVYMEKVIQSL-----QGKCNALLESPTGTGKTLCLLCATLAWRKSL-GDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTI

Query:  VYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQ-NNACRSLCRKRGNRHCNHFTRVSGYVKDNPHL---GDEPI-DIEDLVNIG
         Y +RTH+Q+ QVI+E +KT YR  M VLGSR++ C +  V   +G+   +  CR L + + N  C  F  V G +   P L   G   + DIEDLV IG
Subjt:  VYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQ-NNACRSLCRKRGNRHCNHFTRVSGYVKDNPHL---GDEPI-DIEDLVNIG

Query:  KS
        K+
Subjt:  KS

AT1G79950.1 RAD3-like DNA-binding helicase protein4.8e-7258.3Show/hide
Query:  THEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGD
        T  +  +  + F + L+ +   F   S E + +  MP Y IRGI+V+FPF+AY  Q++YM++VI+SLQ KC+ALLESPTGTGKTLCLLCATLAWRKSLG 
Subjt:  THEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGIDVDFPFDAYDCQLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGD

Query:  FSSGRSVWNSQNTEGGMNVSSSQSTSTRP---PTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHC
        FS+ +   NS       +   SQS        PTIVY +RTHSQLRQVI+ELK++SYRPKMVVLGSREQLC+++EV+ LRG+   NAC+ LC+KRG R C
Subjt:  FSSGRSVWNSQNTEGGMNVSSSQSTSTRP---PTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHDEVSLLRGRTQNNACRSLCRKRGNRHC

Query:  NHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP
        NHF R+  Y+K NPH+GDEP+DIEDLVNIGK  GP
Subjt:  NHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGAATCGACGAAGCGAAAGTGTCAGATCTACAGCTCGATAAATCAAGAAACCCTGAATCAGATACAATATCAGCGTAGGGAAACAAACCTTCAAAGTAATCCAGG
GAAAAGATCACAGATTGAATTCTTGGGTTCTGGAAGTCTCCACAAGACCGCGCTTACACACGAAGACAAGTCGCGCGAGGTTATCATATTCATAATTCGATTGAAGAAGA
TCAACACCAGATTTTCCCGGCAATCTCAAGAGAAAGAACAACGGAAAGAAATGCCGAGATACAAAATCAGAGGTATCGATGTCGACTTCCCGTTTGATGCCTACGATTGC
CAGCTCGTTTACATGGAAAAAGTTATTCAATCTCTCCAGGGGAAATGTAATGCACTTTTAGAGAGTCCAACTGGAACTGGGAAAACACTTTGCCTACTCTGTGCTACACT
GGCCTGGAGGAAGAGTTTGGGTGACTTCTCATCTGGTCGGAGTGTATGGAACAGCCAAAATACTGAGGGTGGTATGAATGTTTCATCATCACAGTCTACTTCAACAAGAC
CTCCGACCATTGTGTACACGACCCGCACTCACAGCCAACTCCGGCAAGTTATTCAAGAGTTGAAGAAAACCTCTTACAGGCCCAAGATGGTAGTTCTAGGATCTCGAGAG
CAATTATGCATTCATGATGAAGTGAGTTTACTCCGTGGGAGAACACAAAACAATGCTTGCCGATCACTTTGCCGAAAACGTGGAAATCGTCATTGCAACCATTTTACGCG
TGTTTCTGGCTATGTGAAGGATAATCCACATCTTGGAGATGAGCCTATCGACATTGAAGATCTGGTCAATATTGGAAAGAGTTTTGGGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCGAATCGACGAAGCGAAAGTGTCAGATCTACAGCTCGATAAATCAAGAAACCCTGAATCAGATACAATATCAGCGTAGGGAAACAAACCTTCAAAGTAATCCAGG
GAAAAGATCACAGATTGAATTCTTGGGTTCTGGAAGTCTCCACAAGACCGCGCTTACACACGAAGACAAGTCGCGCGAGGTTATCATATTCATAATTCGATTGAAGAAGA
TCAACACCAGATTTTCCCGGCAATCTCAAGAGAAAGAACAACGGAAAGAAATGCCGAGATACAAAATCAGAGGTATCGATGTCGACTTCCCGTTTGATGCCTACGATTGC
CAGCTCGTTTACATGGAAAAAGTTATTCAATCTCTCCAGGGGAAATGTAATGCACTTTTAGAGAGTCCAACTGGAACTGGGAAAACACTTTGCCTACTCTGTGCTACACT
GGCCTGGAGGAAGAGTTTGGGTGACTTCTCATCTGGTCGGAGTGTATGGAACAGCCAAAATACTGAGGGTGGTATGAATGTTTCATCATCACAGTCTACTTCAACAAGAC
CTCCGACCATTGTGTACACGACCCGCACTCACAGCCAACTCCGGCAAGTTATTCAAGAGTTGAAGAAAACCTCTTACAGGCCCAAGATGGTAGTTCTAGGATCTCGAGAG
CAATTATGCATTCATGATGAAGTGAGTTTACTCCGTGGGAGAACACAAAACAATGCTTGCCGATCACTTTGCCGAAAACGTGGAAATCGTCATTGCAACCATTTTACGCG
TGTTTCTGGCTATGTGAAGGATAATCCACATCTTGGAGATGAGCCTATCGACATTGAAGATCTGGTCAATATTGGAAAGAGTTTTGGGCCGTAG
Protein sequenceShow/hide protein sequence
MPESTKRKCQIYSSINQETLNQIQYQRRETNLQSNPGKRSQIEFLGSGSLHKTALTHEDKSREVIIFIIRLKKINTRFSRQSQEKEQRKEMPRYKIRGIDVDFPFDAYDC
QLVYMEKVIQSLQGKCNALLESPTGTGKTLCLLCATLAWRKSLGDFSSGRSVWNSQNTEGGMNVSSSQSTSTRPPTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSRE
QLCIHDEVSLLRGRTQNNACRSLCRKRGNRHCNHFTRVSGYVKDNPHLGDEPIDIEDLVNIGKSFGP