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Carg09545 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09545
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthionin-like protein 2
Genome locationCarg_Chr17:6761018..6761466
RNA-Seq ExpressionCarg09545
SyntenyCarg09545
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575552.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4798.92Show/hide
Query:  GRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA
        GRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHM+THYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA
Subjt:  GRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA

KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4377.78Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKS+V+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF ASAP D NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C+ TC+KA
Subjt:  CAGTCIKA

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-55100Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        CAGTCIKA
Subjt:  CAGTCIKA

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]4.4e-4478.7Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF+ASAP D NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C+ TC+KA
Subjt:  CAGTCIKA

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]3.4e-4477.78Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSV++ICFI+SL+ GRSTASF KCYAKCF+ CAITPGI +GTCGA CL  CLFIAS+P+DFNH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C  TCIKA
Subjt:  CAGTCIKA

TrEMBL top hitse value%identityAlignment
A0A0A0KC18 Uncharacterized protein7.3e-3782.61Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEK
        MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPGI +GTCGA CLA CLFIAS+PMD N+M+THYFCKLGCATS CTKFSTK DP +K
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEK

A0A1Q3BXG2 Uncharacterized protein9.3e-2449.53Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        +KS++++C +L L+ G+STASF++CY  CFI C I    ++ +C A CL  C+F +S+ +     +T Y+CKLGCATS+CT  STK DP E+KVE CVDS
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIK
        C+  CI+
Subjt:  CAGTCIK

A0A5D3BCH5 Thionin-like protein 21.3e-2254.05Show/hide
Query:  MKSVVIICFILSLMAGRST--ASFRKCYAKCFIACAITPGI-TLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERC
        M+S+V+I FILSL+AGRST      K + KC   CAI P I  +  C   C+A C+ +AS+PMD N M+THYFCKLGC T  CTK STK D  E KVE C
Subjt:  MKSVVIICFILSLMAGRST--ASFRKCYAKCFIACAITPGI-TLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERC

Query:  VDSCAGTCIKA
         ++C  TC+KA
Subjt:  VDSCAGTCIKA

A0A6J1DDL8 thionin-like protein 27.1e-3265.42Show/hide
Query:  VVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLF-IASAPMDFN-HMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSC
        ++++  +LSL+AG+STASF KCYAKCF+ CAITPGI +GTC A CL  CLF  AS   DFN  ++T YFCKLGCATS+CTKFSTK DP+EKKV  CVDSC
Subjt:  VVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLF-IASAPMDFN-HMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSC

Query:  AGTCIKA
        +  CI A
Subjt:  AGTCIKA

A0A6J1KDK0 thionin-like protein 22.1e-4478.7Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF+ASAP D NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C+ TC+KA
Subjt:  CAGTCIKA

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 24.8e-0935.45Show/hide
Query:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASAP-MDFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC
        +V+I+  I +L+A  +     F++CY  C + C A +       C  TC  +CL   S P +  N+++ + YFCKLGCAT  C   S+  +P+ ++V  C
Subjt:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASAP-MDFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC

Query:  VDSCAGTCIK
        VDSC+  C K
Subjt:  VDSCAGTCIK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.3.4e-1035.45Show/hide
Query:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASAP-MDFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC
        +V+I+  I +L+A  +     F++CY  C + C A +       C  TC  +CL   S P +  N+++ + YFCKLGCAT  C   S+  +P+ ++V  C
Subjt:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASAP-MDFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC

Query:  VDSCAGTCIK
        VDSC+  C K
Subjt:  VDSCAGTCIK

AT1G12672.1 unknown protein1.5e-0544.44Show/hide
Query:  DFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC
        + NH    Y+CKLGC+T  C   S+  +P+  KV  CVDSC+  C
Subjt:  DFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC

AT1G12672.2 unknown protein2.1e-0740.98Show/hide
Query:  TCLAKCLFIASAPMDFNHMNTH--YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC
        +C+  CL   S+ MD  +   H  Y+CKLGC+T  C   S+  +P+  KV  CVDSC+  C
Subjt:  TCLAKCLFIASAPMDFNHMNTH--YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCAGTTGTTATAATTTGCTTCATTCTGAGCTTAATGGCAGGAAGGTCCACAGCGTCCTTTAGGAAGTGCTACGCCAAGTGCTTCATAGCGTGTGCTATCACACC
AGGCATCACCCTTGGCACCTGCGGTGCAACGTGCTTGGCGAAGTGCCTGTTCATTGCATCAGCCCCAATGGATTTCAACCATATGAACACTCATTACTTCTGCAAACTTG
GGTGTGCCACTTCCATGTGCACCAAATTCAGCACCAAGAACGACCCATCTGAGAAGAAAGTGGAAAGGTGTGTGGACTCGTGCGCTGGAACATGCATCAAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAATGAAGTCAGTTGTTATAATTTGCTTCATTCTGAGCTTAATGGCAGGAAGGTCCACAGCGTCCTTTAGGAAGTGCTACGCCAAGTGCTTCATAGCGTGTGCTATCAC
ACCAGGCATCACCCTTGGCACCTGCGGTGCAACGTGCTTGGCGAAGTGCCTGTTCATTGCATCAGCCCCAATGGATTTCAACCATATGAACACTCATTACTTCTGCAAAC
TTGGGTGTGCCACTTCCATGTGCACCAAATTCAGCACCAAGAACGACCCATCTGAGAAGAAAGTGGAAAGGTGTGTGGACTCGTGCGCTGGAACATGCATCAAAGCTTAG
AATGCAGAAACATGAAGAAGGGAGGAGAAGGAGCTGG
Protein sequenceShow/hide protein sequence
MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPMDFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA