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Carg09546 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09546
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthionin-like protein 2
Genome locationCarg_Chr17:6766018..6770029
RNA-Seq ExpressionCarg09546
SyntenyCarg09546
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575553.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5899.09Show/hide
Query:  MKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLLNHPNEKQMKGCVNS
        MKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSC ESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLLNHPNEKQMKGCVNS
Subjt:  MKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLLNHPNEKQMKGCVNS

Query:  CSHTCTNIMN
        CSHTCTNIMN
Subjt:  CSHTCTNIMN

KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]5.2e-10886.16Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDD HRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PDNPKPSFQEVWKRMKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLL
        P                             GISEPTEYVGGPNCYFGCINSC ESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLL
Subjt:  PDNPKPSFQEVWKRMKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLL

Query:  NHPNEKQMKGCVNSCSHTCTNIMN
        NHPNEKQMKGCVNSCSHTCTNIMN
Subjt:  NHPNEKQMKGCVNSCSHTCTNIMN

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-131100Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PDNPKPSFQEVWKRMKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLL
        PDNPKPSFQEVWKRMKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLL
Subjt:  PDNPKPSFQEVWKRMKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLL

Query:  NHPNEKQMKGCVNSCSHTCTNIMN
        NHPNEKQMKGCVNSCSHTCTNIMN
Subjt:  NHPNEKQMKGCVNSCSHTCTNIMN

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]4.1e-5297.14Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PDNPK
        P   K
Subjt:  PDNPK

XP_023547567.1 thionin-like protein 2 [Cucurbita pepo subsp. pepo]1.9e-4995.24Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAA DDVHRQQKNQFFCELGCA SSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PDNPK
        P   K
Subjt:  PDNPK

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein3.4e-3680Show/hide
Query:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHR-QQKNQFFCELGCAASSCTKFSTHQNPDNPK
        K  LMAWL+L+SL+TANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI+PSFPI +A   D VHR QQ+N FFC+LGCAASSCTKFST QNP   K
Subjt:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHR-QQKNQFFCELGCAASSCTKFSTHQNPDNPK

A0A1S3CDU4 thionin-like protein 22.0e-3680Show/hide
Query:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQ-QKNQFFCELGCAASSCTKFSTHQNPDNPK
        K  LMAWL+L+SL+TANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI+PSFPI +   DD VHRQ Q+N FFC+LGCAASSCTKFST QNP   K
Subjt:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQ-QKNQFFCELGCAASSCTKFSTHQNPDNPK

A0A6J1CW29 thionin-like protein 21.2e-2863.06Show/hide
Query:  MESCKAKLGL---MAWLVL--SSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAAD-DDVHRQQKNQFFCELGCAASSCTK
        ME+ + K GL   M WLV+  S +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI +AAA      R+  N FFC+LGCAA+ CT 
Subjt:  MESCKAKLGL---MAWLVL--SSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAAD-DDVHRQQKNQFFCELGCAASSCTK

Query:  FSTHQNPDNPK
        F+T+ NP   K
Subjt:  FSTHQNPDNPK

A0A6J1GMH5 thionin-like protein 22.0e-5297.14Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PDNPK
        P   K
Subjt:  PDNPK

A0A6J1JZ84 thionin-like protein 21.3e-4893.33Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCF+ICAITPGVAFSDCPLRCLQACIIPSFPIHNAAA DDVHRQQKNQFFCELGCAASSCTKFST +N
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PDNPK
        P   K
Subjt:  PDNPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12672.1 unknown protein2.8e-0644.83Show/hide
Query:  KCMISVESTPMQANHMDNRYFCKLGCSTSRCAKL-LLNHPNEKQMKGCVNSCSHTCTN
        K +  ++ST  + NH  N Y+CKLGCST  CA L  + +PN  ++  CV+SCS  C+N
Subjt:  KCMISVESTPMQANHMDNRYFCKLGCSTSRCAKL-LLNHPNEKQMKGCVNSCSHTCTN

AT1G12672.2 unknown protein2.5e-0740.58Show/hide
Query:  SAFQCAICIGKCMISVESTPMQANHMD-NRYFCKLGCSTSRCAKL-LLNHPNEKQMKGCVNSCSHTCTN
        S F+   CI  C+    S     N ++ N Y+CKLGCST  CA L  + +PN  ++  CV+SCS  C+N
Subjt:  SAFQCAICIGKCMISVESTPMQANHMD-NRYFCKLGCSTSRCAKL-LLNHPNEKQMKGCVNSCSHTCTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCTGCAAGGCAAAACTGGGTTTAATGGCGTGGCTGGTGCTGAGCTCATTAACGACGGCGAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCGTCAT
ATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCATTGAGATGCCTCCAAGCCTGCATTATCCCATCTTTTCCTATCCACAACGCCGCCGCCGACGACGACGTCC
ACCGGCAACAAAAGAACCAGTTCTTCTGCGAGCTCGGCTGCGCCGCCTCCTCGTGTACCAAGTTCAGCACCCACCAAAACCCAGACAACCCAAAGCCAAGTTTCCAAGAA
GTTTGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCCCCAATTGCTACTTCGG
CTGCATTAATAGCTGCTTAGAGAGTGCCTTCCAGTGCGCTATTTGCATTGGAAAGTGCATGATAAGCGTCGAGTCCACCCCGATGCAGGCCAACCATATGGACAATCGTT
ACTTCTGCAAGCTTGGGTGTTCCACTTCTCGCTGCGCCAAGCTCCTCCTTAACCATCCAAATGAGAAGCAAATGAAAGGCTGTGTCAACTCGTGCTCGCATACATGCACG
AACATTATGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCTGCAAGGCAAAACTGGGTTTAATGGCGTGGCTGGTGCTGAGCTCATTAACGACGGCGAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCGTCAT
ATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCATTGAGATGCCTCCAAGCCTGCATTATCCCATCTTTTCCTATCCACAACGCCGCCGCCGACGACGACGTCC
ACCGGCAACAAAAGAACCAGTTCTTCTGCGAGCTCGGCTGCGCCGCCTCCTCGTGTACCAAGTTCAGCACCCACCAAAACCCAGACAACCCAAAGCCAAGTTTCCAAGAA
GTTTGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCCCCAATTGCTACTTCGG
CTGCATTAATAGCTGCTTAGAGAGTGCCTTCCAGTGCGCTATTTGCATTGGAAAGTGCATGATAAGCGTCGAGTCCACCCCGATGCAGGCCAACCATATGGACAATCGTT
ACTTCTGCAAGCTTGGGTGTTCCACTTCTCGCTGCGCCAAGCTCCTCCTTAACCATCCAAATGAGAAGCAAATGAAAGGCTGTGTCAACTCGTGCTCGCATACATGCACG
AACATTATGAACTAATAAGACCGACATGACATGACATGACGAGCTAAACTTGGCTTATTGATACTAGGAATAAATAAACAAATGTCAATTTTGGTGTTACAAATCCAAAT
TGATTATAAGTTATGTCGTGTATTAAAGTTTGTGTCTACATCCATCAATAATATGTGAAATAAATAACGTTGCTTACGTGAG
Protein sequenceShow/hide protein sequence
MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPDNPKPSFQE
VWKRMKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLLNHPNEKQMKGCVNSCSHTCT
NIMN