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Carg09553 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09553
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionD-glycerate 3-kinase, chloroplastic isoform X2
Genome locationCarg_Chr17:6819133..6820776
RNA-Seq ExpressionCarg09553
SyntenyCarg09553
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0008887 - glycerate kinase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575565.1 D-glycerate 3-kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.9e-7484.94Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

KAG7014106.1 D-glycerate 3-kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-78100Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLTLETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWRLQAEIAMREAGKPGMSDEEVRDFVS
        MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLTLETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWRLQAEIAMREAGKPGMSDEEVRDFVS
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLTLETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWRLQAEIAMREAGKPGMSDEEVRDFVS

Query:  RYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        RYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  RYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

XP_022954058.1 D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita moschata]6.9e-7484.94Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

XP_022992257.1 D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita maxima]5.9e-7383.73Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNN+MKAYYNAWDKYIKAWIVIKINDPSCVYNWR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        LQAEIAMREAGKPGMSDEEVRDFVSRYLPAY+AYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

XP_023549187.1 D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]6.9e-7484.94Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

TrEMBL top hitse value%identityAlignment
A0A6J1DGD6 D-glycerate 3-kinase, chloroplastic isoform X23.5e-7180.72Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        +TKEGLKMKIPRYDKSAF+GRGDRADPSTWPEVEGPLT                         LETVNNNMKAYY+AWDK+IKAWIVIKINDPSCVY+WR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        LQAEIAMREAGKPGMSDEEVRDFVSRYLPAY+AYLPTLYSEGPSGSDPKRLLVVEIDE+RNPILGY
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

A0A6J1GPZ0 D-glycerate 3-kinase, chloroplastic isoform X11.1e-7283.93Show/hide
Query:  MTK--EGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYN
        MTK  EGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYN
Subjt:  MTK--EGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYN

Query:  WRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        WRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  WRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

A0A6J1GQ19 D-glycerate 3-kinase, chloroplastic isoform X23.4e-7484.94Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

A0A6J1JPA4 D-glycerate 3-kinase, chloroplastic isoform X22.8e-7383.73Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNN+MKAYYNAWDKYIKAWIVIKINDPSCVYNWR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        LQAEIAMREAGKPGMSDEEVRDFVSRYLPAY+AYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

A0A6J1JT25 D-glycerate 3-kinase, chloroplastic isoform X19.2e-7282.74Show/hide
Query:  MTK--EGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYN
        MTK  EGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT                         LETVNN+MKAYYNAWDKYIKAWIVIKINDPSCVYN
Subjt:  MTK--EGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYN

Query:  WRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
        WRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAY+AYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY
Subjt:  WRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPILGY

SwissProt top hitse value%identityAlignment
P42938 Probable ATP-dependent kinase TDA101.6e-0932.9Show/hide
Query:  IPRYDKSAFSGRGDRADPST-------------W-----PEVEG-----PLTLETVNNNMKAYYNA---W-DKYIKA-WIVIKINDPSCVYNWRLQAEIA
        +P+YDKS F G GDR                  W     P ++G      LT + V+ N K ++ +   W +  IK+  IV   ++ + VY WRLQ E  
Subjt:  IPRYDKSAFSGRGDRADPST-------------W-----PEVEG-----PLTLETVNNNMKAYYNA---W-DKYIKA-WIVIKINDPSCVYNWRLQAEIA

Query:  MREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERN
        +      GM+DE+V  FV RY+P+YK YL         GS     L + ID  RN
Subjt:  MREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERN

Q944I4 D-glycerate 3-kinase, chloroplastic7.0e-6168.29Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        +TKEGLKMK+PRY+KSA+SGRGDRAD STWPEVEGPL+                         LE VN N++AYY+AWDKYI AW+VIKI DPS VY WR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL
        LQAEIAMR+ G+ GMSDEEV DFVSRYLPAYKAYLPTLY+EGPSGSDP R+L ++IDEERNPIL
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL

Q9UUH3 Uncharacterized kinase mug583.5e-1232.14Show/hide
Query:  KMKIPRYDKSAFSGRGDRADPSTWPEV----------EG------PL-------------------TLETVNNNMKAYYNAWDKYIKAWIVIKINDPSCV
        ++ IP YDKS F G GDR D S W +           EG      PL                   +L  VN  +  Y   + K I + + ++  + + V
Subjt:  KMKIPRYDKSAFSGRGDRADPSTWPEV----------EG------PL-------------------TLETVNNNMKAYYNAWDKYIKAWIVIKINDPSCV

Query:  YNWRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL
        Y WRLQ E A++     GMSDEEV +FV+ Y+P Y  YL TL ++     +P  L ++ +DE R P++
Subjt:  YNWRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL

Arabidopsis top hitse value%identityAlignment
AT1G80380.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein3.7e-5767.1Show/hide
Query:  IPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWRLQAEIAMRE
        +PRY+KSA+SGRGDRAD STWPEVEGPL+                         LE VN N++AYY+AWDKYI AW+VIKI DPS VY WRLQAEIAMR+
Subjt:  IPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWRLQAEIAMRE

Query:  AGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL
         G+ GMSDEEV DFVSRYLPAYKAYLPTLY+EGPSGSDP R+L ++IDEERNPIL
Subjt:  AGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL

AT1G80380.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.0e-6268.29Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        +TKEGLKMK+PRY+KSA+SGRGDRAD STWPEVEGPL+                         LE VN N++AYY+AWDKYI AW+VIKI DPS VY WR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL
        LQAEIAMR+ G+ GMSDEEV DFVSRYLPAYKAYLPTLY+EGPSGSDP R+L ++IDEERNPIL
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL

AT1G80380.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.0e-6268.29Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        +TKEGLKMK+PRY+KSA+SGRGDRAD STWPEVEGPL+                         LE VN N++AYY+AWDKYI AW+VIKI DPS VY WR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL
        LQAEIAMR+ G+ GMSDEEV DFVSRYLPAYKAYLPTLY+EGPSGSDP R+L ++IDEERNPIL
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL

AT1G80380.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.2e-5765.85Show/hide
Query:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR
        +TKEGLKM      KSA+SGRGDRAD STWPEVEGPL+                         LE VN N++AYY+AWDKYI AW+VIKI DPS VY WR
Subjt:  MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLT-------------------------LETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWR

Query:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL
        LQAEIAMR+ G+ GMSDEEV DFVSRYLPAYKAYLPTLY+EGPSGSDP R+L ++IDEERNPIL
Subjt:  LQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYLPTLYSEGPSGSDPKRLLVVEIDEERNPIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAAGGAAGGTTTAAAGATGAAGATTCCCAGATATGATAAATCTGCATTCAGTGGAAGAGGTGACAGGGCTGATCCTTCTACTTGGCCAGAGGTTGAAGGACCACT
AACACTTGAGACAGTGAACAACAACATGAAAGCGTACTACAACGCTTGGGATAAGTACATAAAGGCGTGGATCGTGATCAAGATAAACGACCCCAGTTGTGTTTACAATT
GGCGGCTGCAGGCAGAGATTGCAATGAGAGAGGCAGGAAAACCCGGGATGAGCGACGAAGAGGTTAGAGATTTTGTTTCACGTTATCTGCCGGCGTACAAGGCTTATCTT
CCCACGTTATACTCGGAAGGGCCAAGTGGGTCAGATCCAAAGAGGCTGCTTGTGGTTGAAATCGATGAAGAAAGGAATCCAATTCTTGGTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCAAGGAAGGTTTAAAGATGAAGATTCCCAGATATGATAAATCTGCATTCAGTGGAAGAGGTGACAGGGCTGATCCTTCTACTTGGCCAGAGGTTGAAGGACCACT
AACACTTGAGACAGTGAACAACAACATGAAAGCGTACTACAACGCTTGGGATAAGTACATAAAGGCGTGGATCGTGATCAAGATAAACGACCCCAGTTGTGTTTACAATT
GGCGGCTGCAGGCAGAGATTGCAATGAGAGAGGCAGGAAAACCCGGGATGAGCGACGAAGAGGTTAGAGATTTTGTTTCACGTTATCTGCCGGCGTACAAGGCTTATCTT
CCCACGTTATACTCGGAAGGGCCAAGTGGGTCAGATCCAAAGAGGCTGCTTGTGGTTGAAATCGATGAAGAAAGGAATCCAATTCTTGGTTATTAGGTGGGTTTCTCAGC
TTTCACATGCTCTTTTGACTGCCTTTTTACACCCCTATGTGGATACCACCTACCTACTACTTACACACAGGTAAGAGCTCTTACTTTTGGATTGTTCCATAAATTGCAAA
TTTAGTCTTTAAAAAAAAATTCAAAACTTTTAT
Protein sequenceShow/hide protein sequence
MTKEGLKMKIPRYDKSAFSGRGDRADPSTWPEVEGPLTLETVNNNMKAYYNAWDKYIKAWIVIKINDPSCVYNWRLQAEIAMREAGKPGMSDEEVRDFVSRYLPAYKAYL
PTLYSEGPSGSDPKRLLVVEIDEERNPILGY