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Carg09565 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09565
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:6893762..6894007
RNA-Seq ExpressionCarg09565
SyntenyCarg09565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014118.1 hypothetical protein SDJN02_24291, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-39100Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

XP_022960101.1 uncharacterized protein LOC111460952 [Cucurbita moschata]3.9e-2979.01Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MATNL +FH APIRA S G SEPNRRK AAAPKWWSPIFGWSSEPDY+ SS+A+QPVQNA+P+LDGGR KS+F PGCFT+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

XP_022991633.1 uncharacterized protein LOC111488192 [Cucurbita maxima]1.2e-3086.42Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MAT+LAIFH  PIRA SFG SEPNRRK A APKWWSPIFGWSSEPDYV SSSAEQPVQNANPKLD GRAKSRFS GCFT+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

XP_023004861.1 uncharacterized protein LOC111498038 [Cucurbita maxima]6.0e-3080.25Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MATNL +FH+APIRA S G SEPNRRK AAAPKWWSPIFGWSSEPDY+ SS+A+QPVQNA+P+LDGGRAKS+F PGCFT+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

XP_023514525.1 uncharacterized protein LOC111778781 [Cucurbita pepo subsp. pepo]3.3e-2877.78Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MATNL +FH+APIRA S G SEPNRRK AAAPKWWSPIFGWSSEPDY+ SS+A+Q VQNA+P+LDGGR KS+F PGCFT+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

TrEMBL top hitse value%identityAlignment
A0A1S3CEC0 uncharacterized protein LOC1034997701.1e-2472.94Show/hide
Query:  MATNLAIFHLAPIRA---FSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAE-QPVQNANPKLDGGRAKSRFSPGCFTKE
        MATN A+FH  PIRA    S G S+PNRR  AA PKWWSPIFGWSSEPDYVVSS+AE Q VQNA+P+LDGGR  SRF+PGCFT+E
Subjt:  MATNLAIFHLAPIRA---FSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAE-QPVQNANPKLDGGRAKSRFSPGCFTKE

A0A5D3CF29 Uncharacterized protein1.1e-2472.94Show/hide
Query:  MATNLAIFHLAPIRA---FSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAE-QPVQNANPKLDGGRAKSRFSPGCFTKE
        MATN A+FH  PIRA    S G S+PNRR  AA PKWWSPIFGWSSEPDYVVSS+AE Q VQNA+P+LDGGR  SRF+PGCFT+E
Subjt:  MATNLAIFHLAPIRA---FSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAE-QPVQNANPKLDGGRAKSRFSPGCFTKE

A0A6J1H6P9 uncharacterized protein LOC1114609521.9e-2979.01Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MATNL +FH APIRA S G SEPNRRK AAAPKWWSPIFGWSSEPDY+ SS+A+QPVQNA+P+LDGGR KS+F PGCFT+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

A0A6J1JWV4 uncharacterized protein LOC1114881925.9e-3186.42Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MAT+LAIFH  PIRA SFG SEPNRRK A APKWWSPIFGWSSEPDYV SSSAEQPVQNANPKLD GRAKSRFS GCFT+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

A0A6J1KTB2 uncharacterized protein LOC1114980382.9e-3080.25Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MATNL +FH+APIRA S G SEPNRRK AAAPKWWSPIFGWSSEPDY+ SS+A+QPVQNA+P+LDGGRAKS+F PGCFT+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein7.6e-0738.82Show/hide
Query:  MATNLAIFHLAPIRAFSFG---NSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANP-KLDGGRAKSRFSPGCFTKE
        MA  +    L  IRA S     N + NR+K+AA   WW+P+FG  S+PDY+   + E      NP K D   +  +F  GCFT+E
Subjt:  MATNLAIFHLAPIRAFSFG---NSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANP-KLDGGRAKSRFSPGCFTKE

AT3G15630.1 unknown protein3.4e-0738.27Show/hide
Query:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE
        MAT ++   L+ IRA S   S+P R+K  ++  WW+P+FG SSEPDYV         +  N + D  +A+ R    C T+E
Subjt:  MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAATCTTGCCATTTTTCACCTTGCTCCGATCAGAGCTTTTTCTTTTGGAAATTCTGAACCTAATCGCCGGAAGGCCGCCGCCGCGCCGAAGTGGTGGTCTCC
GATCTTCGGCTGGTCGTCCGAGCCGGACTACGTCGTTTCTTCCTCCGCGGAACAGCCGGTTCAGAATGCTAATCCAAAGCTCGATGGTGGACGAGCCAAATCCAGATTCT
CGCCTGGATGTTTCACAAAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCAATCTTGCCATTTTTCACCTTGCTCCGATCAGAGCTTTTTCTTTTGGAAATTCTGAACCTAATCGCCGGAAGGCCGCCGCCGCGCCGAAGTGGTGGTCTCC
GATCTTCGGCTGGTCGTCCGAGCCGGACTACGTCGTTTCTTCCTCCGCGGAACAGCCGGTTCAGAATGCTAATCCAAAGCTCGATGGTGGACGAGCCAAATCCAGATTCT
CGCCTGGATGTTTCACAAAGGAGTAA
Protein sequenceShow/hide protein sequence
MATNLAIFHLAPIRAFSFGNSEPNRRKAAAAPKWWSPIFGWSSEPDYVVSSSAEQPVQNANPKLDGGRAKSRFSPGCFTKE