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Carg09569 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09569
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlate embryogenesis abundant protein 1-like
Genome locationCarg_Chr17:6906099..6906482
RNA-Seq ExpressionCarg09569
SyntenyCarg09569
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575581.1 hypothetical protein SDJN03_26220, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2068.69Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDE-------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI
        MASQQDLSFKAGETVGQAQVKKDE                               TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI
Subjt:  MASQQDLSFKAGETVGQAQVKKDE-------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI

KAG7014122.1 hypothetical protein SDJN02_24295, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-25100Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI
        MASQQDLSFKAGETVGQAQVKKDETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI
Subjt:  MASQQDLSFKAGETVGQAQVKKDETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI

KAG7025770.1 hypothetical protein SDJN02_12268, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-1676.81Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPN-NNPTNNPSPTI
        MASQQD+S   GE VGQAQVKKDETGEQVK+MAQGAAEAVKNTLGM TD+ +  + N NNPTN PSPTI
Subjt:  MASQQDLSFKAGETVGQAQVKKDETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPN-NNPTNNPSPTI

XP_022954121.1 late embryogenesis abundant protein 1-like [Cucurbita moschata]4.7e-2068.37Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDE-------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPT
        MASQQDLSFKAGETVGQAQVKKDE                               TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPT
Subjt:  MASQQDLSFKAGETVGQAQVKKDE-------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPT

XP_022991676.1 late embryogenesis abundant protein 1-like [Cucurbita maxima]1.5e-1863.64Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKD-------------------------------ETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI
        MASQQDLS+KAGETVGQAQ  KD                               +TGEQVKSMAQGAAEAVKNTLGMKTDTDTTT+PNNNPTNNPSPTI
Subjt:  MASQQDLSFKAGETVGQAQVKKD-------------------------------ETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI

TrEMBL top hitse value%identityAlignment
A0A1S3CF46 late embryogenesis abundant protein 13.7e-1057.29Show/hide
Query:  MASQQD-LSFKAGETVGQAQVKKDE-----------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPN-NNPTNNPS
        MAS QD LS KAGETVGQAQVKKDE                             TGEQVK+MAQGAAEAVKNTLGM  +TD T++PN NNPTNNP+
Subjt:  MASQQD-LSFKAGETVGQAQVKKDE-----------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPN-NNPTNNPS

A0A5D3CF20 Late embryogenesis abundant protein 11.7e-1052.29Show/hide
Query:  MASQQD-LSFKAGETVGQAQVKKDE-----------------------------TGEQVKSMAQGAAEAVKNTLGMKTD-----------TDTTTSPNNN
        MAS QD LS KAGETVGQAQVKKDE                             TGEQVK+MAQGAAEAVKNTLGM TD            + TT+P+NN
Subjt:  MASQQD-LSFKAGETVGQAQVKKDE-----------------------------TGEQVKSMAQGAAEAVKNTLGMKTD-----------TDTTTSPNNN

Query:  PTNNPSPTI
        PTNNPS  I
Subjt:  PTNNPSPTI

A0A6J1GQ03 late embryogenesis abundant protein 1-like2.3e-2068.37Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDE-------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPT
        MASQQDLSFKAGETVGQAQVKKDE                               TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPT
Subjt:  MASQQDLSFKAGETVGQAQVKKDE-------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPT

A0A6J1JRF1 late embryogenesis abundant protein 1-like7.4e-1963.64Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKD-------------------------------ETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI
        MASQQDLS+KAGETVGQAQ  KD                               +TGEQVKSMAQGAAEAVKNTLGMKTDTDTTT+PNNNPTNNPSPTI
Subjt:  MASQQDLSFKAGETVGQAQVKKD-------------------------------ETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI

A0A6J1KJU5 late embryogenesis abundant protein 16.3e-1047.75Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDE------------------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPN-
        MASQQD+S   GE VGQAQVKKDE                                          TGEQVK+MAQGAAEAVKNTLGM TD+ +  + N 
Subjt:  MASQQDLSFKAGETVGQAQVKKDE------------------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPN-

Query:  NNPTNNPSPTI
        NNPTN PSPTI
Subjt:  NNPTNNPSPTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.3.9e-0440.91Show/hide
Query:  MASQQD--LSFKAGETVGQAQVKKD-------------ETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNN-----NPTNNPSPTI
        MAS QD   S +AG+ VGQA VK++             + GE+VKSMA  A+EAVKN LG+  D +      N     NP N  SP++
Subjt:  MASQQD--LSFKAGETVGQAQVKKD-------------ETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNN-----NPTNNPSPTI

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related1.3e-0434.58Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDE--------------------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSP
        M+S Q LS  AGE  GQ Q+KK+E                                            TG QVK+MAQGAA+AVKNTLGM   T++ +SP
Subjt:  MASQQDLSFKAGETVGQAQVKKDE--------------------------------------------TGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSP

Query:  NNNPTNN
             +N
Subjt:  NNNPTNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCAACAGGATTTGAGCTTCAAGGCTGGGGAGACTGTTGGGCAAGCTCAGGTCAAGAAGGATGAGACTGGAGAGCAAGTGAAGAGCATGGCACAAGGAGCAGC
TGAGGCAGTGAAGAACACACTTGGGATGAAGACTGACACTGATACCACCACCTCACCCAACAACAACCCTACCAACAATCCTTCCCCTACAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCCAACAGGATTTGAGCTTCAAGGCTGGGGAGACTGTTGGGCAAGCTCAGGTCAAGAAGGATGAGACTGGAGAGCAAGTGAAGAGCATGGCACAAGGAGCAGC
TGAGGCAGTGAAGAACACACTTGGGATGAAGACTGACACTGATACCACCACCTCACCCAACAACAACCCTACCAACAATCCTTCCCCTACAATTTAA
Protein sequenceShow/hide protein sequence
MASQQDLSFKAGETVGQAQVKKDETGEQVKSMAQGAAEAVKNTLGMKTDTDTTTSPNNNPTNNPSPTI