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Carg09583 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09583
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr17:6956399..6957698
RNA-Seq ExpressionCarg09583
SyntenyCarg09583
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575594.1 hypothetical protein SDJN03_26233, partial [Cucurbita argyrosperma subsp. sororia]6.8e-47100Show/hide
Query:  MKVRATVPQNQAKLNPFIMAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE
        MKVRATVPQNQAKLNPFIMAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE
Subjt:  MKVRATVPQNQAKLNPFIMAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE

Query:  E
        E
Subjt:  E

KAG7014136.1 hypothetical protein SDJN02_24309, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-92100Show/hide
Query:  MKVRATVPQNQAKLNPFIMAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE
        MKVRATVPQNQAKLNPFIMAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE
Subjt:  MKVRATVPQNQAKLNPFIMAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE

Query:  EALCNILHSSFPPFLSVHASILGWKSASLRFLELHPPCVAQQYGGHQTPIRLPRRICSSNRFLFVADVISILFA
        EALCNILHSSFPPFLSVHASILGWKSASLRFLELHPPCVAQQYGGHQTPIRLPRRICSSNRFLFVADVISILFA
Subjt:  EALCNILHSSFPPFLSVHASILGWKSASLRFLELHPPCVAQQYGGHQTPIRLPRRICSSNRFLFVADVISILFA

XP_022953925.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita moschata]5.1e-3497.59Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE
        MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA  VVPVHKMKGKAFNAIASSREEE
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE

XP_022991788.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita maxima]6.2e-3293.98Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE
        MAMPFLKLAIVLAVFFFFFS VPPKSVGLVLEANMKIGSRPPGC +KCMSCRPCMAAAA  VVPVHKMKGKAFNAIASSREEE
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE

XP_023548448.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita pepo subsp. pepo]3.4e-3090.59Show/hide
Query:  MAMPFLKLAIVLAVF---FFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE
        MAMPFLKL IVLAVF   FFFFS VPPKSVGL+LE NMKIGSRPPGCVNKCMSCRPCMAAAAA VVPVHKMKGKAFNAIASSREE
Subjt:  MAMPFLKLAIVLAVF---FFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREE

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein1.5e-1555.14Show/hide
Query:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLV-------------------LEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAI
        MA+P      LKLA+ LA FF F   +PP SVGLV                   LE  M IGSRPPGC NKCM+CRPCMAAA   VVPVH+MKGKAF + 
Subjt:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLV-------------------LEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAI

Query:  ASSREEE
        +SSREEE
Subjt:  ASSREEE

A0A1S3CDZ4 Epidermal patterning factor-like protein3.3e-1554.21Show/hide
Query:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVL-------------------EANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAI
        MA+P      LKLA+ LA FF F   +PP SVGLVL                   +  M IGSRPPGC NKCM+CRPCMAAA   VVPVH+MKGKAF + 
Subjt:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVL-------------------EANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAI

Query:  ASSREEE
        +SSREEE
Subjt:  ASSREEE

A0A5D3CGR2 Epidermal patterning factor-like protein5.7e-1554.21Show/hide
Query:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVLEAN-------------------MKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAI
        MA+P      LKLA+ LA FF F   +PP SVGLVL  +                   M IGSRPPGC NKCM+CRPCMAAA   VVPVH+MKGKAF + 
Subjt:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVLEAN-------------------MKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAI

Query:  ASSREEE
        +SSREEE
Subjt:  ASSREEE

A0A6J1GR07 Epidermal patterning factor-like protein2.5e-3497.59Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE
        MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA  VVPVHKMKGKAFNAIASSREEE
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE

A0A6J1JXA0 Epidermal patterning factor-like protein3.0e-3293.98Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE
        MAMPFLKLAIVLAVFFFFFS VPPKSVGLVLEANMKIGSRPPGC +KCMSCRPCMAAAA  VVPVHKMKGKAFNAIASSREEE
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTCAGAGCAACAGTTCCCCAAAACCAAGCCAAGCTCAACCCTTTCATAATGGCTATGCCATTCCTCAAACTGGCTATTGTTCTTGCTGTGTTCTTCTTCTTCTT
CTCACCTGTTCCTCCTAAGTCAGTTGGGTTGGTTTTGGAGGCAAACATGAAGATTGGTTCACGGCCGCCGGGATGTGTGAATAAATGCATGAGTTGTAGGCCGTGCATGG
CGGCGGCGGCGGCGGTGGTGGTGCCGGTGCATAAGATGAAGGGGAAGGCCTTCAATGCCATTGCTTCCTCTCGGGAGGAAGAGGCTCTCTGCAACATTCTTCACAGTTCG
TTCCCGCCTTTTCTCTCTGTTCATGCTTCCATACTCGGCTGGAAATCGGCTTCTCTTCGCTTCCTTGAGCTGCATCCGCCGTGTGTAGCGCAGCAATACGGCGGCCACCA
GACTCCGATCCGCCTTCCGAGAAGGATCTGTTCGTCTAATAGGTTCCTTTTCGTTGCTGATGTTATCTCCATTTTATTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTCAGAGCAACAGTTCCCCAAAACCAAGCCAAGCTCAACCCTTTCATAATGGCTATGCCATTCCTCAAACTGGCTATTGTTCTTGCTGTGTTCTTCTTCTTCTT
CTCACCTGTTCCTCCTAAGTCAGTTGGGTTGGTTTTGGAGGCAAACATGAAGATTGGTTCACGGCCGCCGGGATGTGTGAATAAATGCATGAGTTGTAGGCCGTGCATGG
CGGCGGCGGCGGCGGTGGTGGTGCCGGTGCATAAGATGAAGGGGAAGGCCTTCAATGCCATTGCTTCCTCTCGGGAGGAAGAGGCTCTCTGCAACATTCTTCACAGTTCG
TTCCCGCCTTTTCTCTCTGTTCATGCTTCCATACTCGGCTGGAAATCGGCTTCTCTTCGCTTCCTTGAGCTGCATCCGCCGTGTGTAGCGCAGCAATACGGCGGCCACCA
GACTCCGATCCGCCTTCCGAGAAGGATCTGTTCGTCTAATAGGTTCCTTTTCGTTGCTGATGTTATCTCCATTTTATTTGCTTAA
Protein sequenceShow/hide protein sequence
MKVRATVPQNQAKLNPFIMAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAAVVVPVHKMKGKAFNAIASSREEEALCNILHSS
FPPFLSVHASILGWKSASLRFLELHPPCVAQQYGGHQTPIRLPRRICSSNRFLFVADVISILFA