; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09601 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09601
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncalcineurin subunit B
Genome locationCarg_Chr17:7035107..7037198
RNA-Seq ExpressionCarg09601
SyntenyCarg09601
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014153.1 Calcineurin subunit B [Cucurbita argyrosperma subsp. argyrosperma]2.2e-66100Show/hide
Query:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
        MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
Subjt:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG

Query:  KVSFNDIIEVLGDSKYCANCYKKQAIQETLS
        KVSFNDIIEVLGDSKYCANCYKKQAIQETLS
Subjt:  KVSFNDIIEVLGDSKYCANCYKKQAIQETLS

XP_022953695.1 calcineurin subunit B-like isoform X2 [Cucurbita moschata]1.8e-55100Show/hide
Query:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
        MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
Subjt:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG

Query:  KVSFNDIIEVLGDS
        KVSFNDIIEVLGDS
Subjt:  KVSFNDIIEVLGDS

XP_022991501.1 calcineurin subunit B-like isoform X2 [Cucurbita maxima]1.4e-5285.61Show/hide
Query:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
        MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCN 
Subjt:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG

Query:  KVSFNDIIEVLGD--SKYCANCYKKQAIQETL
        KVSFN IIEVLGD  S + ++  ++Q + + L
Subjt:  KVSFNDIIEVLGD--SKYCANCYKKQAIQETL

XP_023548811.1 calcineurin subunit B-like isoform X2 [Cucurbita pepo subsp. pepo]3.3e-5498.25Show/hide
Query:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
        MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFL+VPEFAMNPL QRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
Subjt:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG

Query:  KVSFNDIIEVLGDS
        KVSFNDIIEVLGDS
Subjt:  KVSFNDIIEVLGDS

XP_038898822.1 calcineurin subunit B-like isoform X2 [Benincasa hispida]1.1e-4991.15Show/hide
Query:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
        MILKKFKSTAI+FLVSQQEIVSL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAFLSAFSAKAS+ HKIEFIFK+YD DCNG
Subjt:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG

Query:  KVSFNDIIEVLGD
        KVSFNDIIEVL D
Subjt:  KVSFNDIIEVLGD

TrEMBL top hitse value%identityAlignment
A0A6J1GNT2 calcineurin subunit B-like isoform X31.7e-4899.01Show/hide
Query:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
        L SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
Subjt:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD

Query:  S
        S
Subjt:  S

A0A6J1GNZ0 calcineurin subunit B-like isoform X41.7e-4899.01Show/hide
Query:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
        L SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
Subjt:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD

Query:  S
        S
Subjt:  S

A0A6J1GP06 calcineurin subunit B-like isoform X11.7e-4899.01Show/hide
Query:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
        L SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
Subjt:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD

Query:  S
        S
Subjt:  S

A0A6J1GQD6 calcineurin subunit B-like isoform X28.5e-56100Show/hide
Query:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
        MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
Subjt:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG

Query:  KVSFNDIIEVLGDS
        KVSFNDIIEVLGDS
Subjt:  KVSFNDIIEVLGDS

A0A6J1JQX3 calcineurin subunit B-like isoform X26.8e-5385.61Show/hide
Query:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG
        MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCN 
Subjt:  MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNG

Query:  KVSFNDIIEVLGD--SKYCANCYKKQAIQETL
        KVSFN IIEVLGD  S + ++  ++Q + + L
Subjt:  KVSFNDIIEVLGD--SKYCANCYKKQAIQETL

SwissProt top hitse value%identityAlignment
P0CM54 Calcineurin subunit B2.7e-1436.44Show/hide
Query:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV
        S  E++ L ++F +LD++  G I  DEFL +P+ A NPL  R++ + D      ++F++FV  LSAFS+K     K+ F FK+YD+D +G +S  ++  V
Subjt:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV

Query:  LGDSKYCANCYKKQAIQE
        L   +   N  K Q +Q+
Subjt:  LGDSKYCANCYKKQAIQE

P0CM55 Calcineurin subunit B2.7e-1436.44Show/hide
Query:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV
        S  E++ L ++F +LD++  G I  DEFL +P+ A NPL  R++ + D      ++F++FV  LSAFS+K     K+ F FK+YD+D +G +S  ++  V
Subjt:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV

Query:  LGDSKYCANCYKKQAIQE
        L   +   N  K Q +Q+
Subjt:  LGDSKYCANCYKKQAIQE

P42322 Calcineurin subunit B6.8e-1842.57Show/hide
Query:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV
        +Q+EI  L+++F +LD++  G IS DEFL +PE A+NPL +R++ + D      +NFK+F+A LS F+A+     K+EF FK+YD+D +G +S  ++  V
Subjt:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV

Query:  L
        L
Subjt:  L

P87072 Calcineurin subunit B7.8e-1437Show/hide
Query:  QQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL
        ++E+  L ++F +LD+++ G I  +EFLS+P+ + NPL  R++ + D      ++F++FV+ LSAFS+K +   K+ F FK+YD+D +G +S  ++  VL
Subjt:  QQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL

Q55G87 Calcineurin subunit B type 11.9e-1535.64Show/hide
Query:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV
        S+ E+  L+++F  LD++  G ++ DEFLS+P+ A+NPL +R++++ D      + F +FV  L+  S K +   K++F+F++YD+DC+G +S  ++ +V
Subjt:  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT3G18430.1 Calcium-binding EF-hand family protein2.8e-4371.43Show/hide
Query:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
        L  QQEI+SL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAFLSAFSAKASL  K++ IFK+YD DCNGKVSF DI+EVL D
Subjt:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD

Query:  --SKYCANCYKKQAIQETL
            + ++  ++Q + + L
Subjt:  --SKYCANCYKKQAIQETL

AT3G18430.2 Calcium-binding EF-hand family protein2.8e-4371.43Show/hide
Query:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD
        L  QQEI+SL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAFLSAFSAKASL  K++ IFK+YD DCNGKVSF DI+EVL D
Subjt:  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD

Query:  --SKYCANCYKKQAIQETL
            + ++  ++Q + + L
Subjt:  --SKYCANCYKKQAIQETL

AT3G22930.1 calmodulin-like 111.0e-0526.42Show/hide
Query:  VSQQEIVSLFQKFCQLDRNSKGFISADEFLSV-PEFAMNPLPQRLLKMV-----DG---LNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFN
        ++Q++I+   + FC  D++  G I+ADE  +V      NP  Q L  M+     DG   + F +F+  ++    +     +++  FK++D D NG +S +
Subjt:  VSQQEIVSLFQKFCQLDRNSKGFISADEFLSV-PEFAMNPLPQRLLKMV-----DG---LNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFN

Query:  DIIEVL
        ++  V+
Subjt:  DIIEVL

AT4G17615.1 calcineurin B-like protein 13.3e-0732.08Show/hide
Query:  SQQEIVSLFQKFCQLDRN--SKGFISADEF---LSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFN
        S  E+ +LF+ F  +  +    G I+ +EF   L       N    R+  M D      ++F DFV  L+ F   ASL  KI+F F+LYD+DC G +   
Subjt:  SQQEIVSLFQKFCQLDRN--SKGFISADEF---LSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFN

Query:  DIIEVL
        ++ ++L
Subjt:  DIIEVL

AT5G47100.1 calcineurin B-like protein 98.0e-0629.25Show/hide
Query:  SQQEIVSLFQKFCQLDRN--SKGFISADEF---LSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFN
        S  E+ +L++ F  +  +    G I+ +EF   L       N    R+  + D      ++F DFV  L+ F   ASL  K +F F+LYD+DC G +   
Subjt:  SQQEIVSLFQKFCQLDRN--SKGFISADEF---LSVPEFAMNPLPQRLLKMVD-----GLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFN

Query:  DIIEVL
        ++ ++L
Subjt:  DIIEVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTGAAGAAGTTCAAGAGCACTGCAATAAGCTTTTTAGTCTCCCAACAGGAAATAGTGTCATTGTTTCAGAAATTCTGCCAGCTTGATAGAAATTCCAAGGGGTT
TATTTCAGCTGATGAGTTCCTTTCAGTTCCTGAATTTGCTATGAATCCACTTCCTCAGCGTCTGCTCAAGATGGTTGATGGTTTGAATTTTAAGGATTTTGTGGCTTTCT
TGTCAGCATTCAGTGCTAAAGCTAGTTTGCACCATAAGATTGAATTTATTTTCAAGCTATATGATGTTGACTGCAACGGGAAGGTGTCTTTCAACGACATCATTGAAGTG
CTTGGGGATTCCAAGTATTGTGCCAATTGTTACAAGAAGCAGGCTATACAAGAAACTCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
GATGGTTCCATTTCTATATATGATGTGAGTAAGTAGAAGAAACCGCTCATTATCAGGTCAGCTGTGGTTTTCAGGTCTGTTCTTCTTTCCCCTTTCACCATTTTTGTCGC
AGTTTTCTATCCGTTTGAAGCTTCATTGTTTGAATTTCAGTCGATCCATTAAATTTGAGGTTCTTACTTGTTCTATTCCGACTCTCTCTGTATTTGATCACTGATTTGGT
TGAGCGGTTTTTATGAGGGTTTTCCGATTTCAGAAGTTCGATTCCTTAGTATCATTTAGAAATTGGGCAAGAATTCATGGGGAATACCTCGTCGATGCTCACTCAATATG
ATATTGAAGAAGTTCAAGAGCACTGCAATAAGCTTTTTAGTCTCCCAACAGGAAATAGTGTCATTGTTTCAGAAATTCTGCCAGCTTGATAGAAATTCCAAGGGGTTTAT
TTCAGCTGATGAGTTCCTTTCAGTTCCTGAATTTGCTATGAATCCACTTCCTCAGCGTCTGCTCAAGATGGTTGATGGTTTGAATTTTAAGGATTTTGTGGCTTTCTTGT
CAGCATTCAGTGCTAAAGCTAGTTTGCACCATAAGATTGAATTTATTTTCAAGCTATATGATGTTGACTGCAACGGGAAGGTGTCTTTCAACGACATCATTGAAGTGCTT
GGGGATTCCAAGTATTGTGCCAATTGTTACAAGAAGCAGGCTATACAAGAAACTCTCTCTTGA
Protein sequenceShow/hide protein sequence
MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEV
LGDSKYCANCYKKQAIQETLS