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Carg09605 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09605
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSerine-rich protein-related
Genome locationCarg_Chr17:7054577..7055739
RNA-Seq ExpressionCarg09605
SyntenyCarg09605
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]2.5e-2469.52Show/hide
Query:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH
        MANKTASSSRLCLCAPT+HPGSFRCSLHRRP  +S KT        GSQSKAAT T+T     K FLMQ +KPSSH L+RR NFQPKPSRFCN  +A D 
Subjt:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH

Query:  RLEVS
        RL VS
Subjt:  RLEVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2472.55Show/hide
Query:  MANKTA-SSSRLCLCAPTSHPGSFRCSLHRRPRKASDK--TTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCNAASDHRLE
        MANKTA SS RLCLCAPT+HPGSFRCSLHRR RKAS+K       G+QSKA +AT     L K FLMQ IKPSS DL RRRNFQPKPSRFCNAASD+ L 
Subjt:  MANKTA-SSSRLCLCAPTSHPGSFRCSLHRRPRKASDK--TTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCNAASDHRLE

Query:  VS
        VS
Subjt:  VS

KAG7014157.1 hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-107100Show/hide
Query:  MVGVGCKKPSVTRYAPEYCSQVIESSTYAPRWQTSPRRGTTKQPLQVTATVARSEDKLGKKVEVNYKFTPPTKLNSEGERVVQVKTPKINSVILIGSYNF
        MVGVGCKKPSVTRYAPEYCSQVIESSTYAPRWQTSPRRGTTKQPLQVTATVARSEDKLGKKVEVNYKFTPPTKLNSEGERVVQVKTPKINSVILIGSYNF
Subjt:  MVGVGCKKPSVTRYAPEYCSQVIESSTYAPRWQTSPRRGTTKQPLQVTATVARSEDKLGKKVEVNYKFTPPTKLNSEGERVVQVKTPKINSVILIGSYNF

Query:  PSPMANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRRNFQPKPSRFCNAASDHRLEV
        PSPMANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRRNFQPKPSRFCNAASDHRLEV
Subjt:  PSPMANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRRNFQPKPSRFCNAASDHRLEV

Query:  SSS
        SSS
Subjt:  SSS

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2372.73Show/hide
Query:  MANKTA-SSSRLCLCAPTSHPGSFRCSLHRRPRKASDK--TTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCNAASDHRL
        MANKTA SS RLCLCAPT+HPGSFRCSLHRR RKAS+K       G+QSKA +AT     L K FLMQ IKPSS DL RRRNFQPKPSRFCNAASD+ L
Subjt:  MANKTA-SSSRLCLCAPTSHPGSFRCSLHRRPRKASDK--TTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCNAASDHRL

XP_008461151.1 PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]9.5e-2468.57Show/hide
Query:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH
        M NKTASSSRLCLCAPT+HPGSFRCSLHRRP  +S KT        GSQSKAAT T+T     K FLMQ +KPSSH L+RR NFQPKPSRFCN  +A D 
Subjt:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH

Query:  RLEVS
        RL VS
Subjt:  RLEVS

TrEMBL top hitse value%identityAlignment
A0A0A0K698 Uncharacterized protein1.0e-2367.92Show/hide
Query:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKT-----TLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASD
        M NKTASSSRLCLCAPT+HPGSFRCSLHRR   +S KT        RGSQSKAA AT+T   L K FLMQ +KPSSHDL+RR +F+PKPSRFC+  +ASD
Subjt:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKT-----TLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASD

Query:  HRLEVS
         RL VS
Subjt:  HRLEVS

A0A1S3CEH6 uncharacterized protein LOC1034998224.6e-2468.57Show/hide
Query:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH
        M NKTASSSRLCLCAPT+HPGSFRCSLHRRP  +S KT        GSQSKAAT T+T     K FLMQ +KPSSH L+RR NFQPKPSRFCN  +A D 
Subjt:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH

Query:  RLEVS
        RL VS
Subjt:  RLEVS

A0A5A7UZ19 Uncharacterized protein1.2e-2469.52Show/hide
Query:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH
        MANKTASSSRLCLCAPT+HPGSFRCSLHRRP  +S KT        GSQSKAAT T+T     K FLMQ +KPSSH L+RR NFQPKPSRFCN  +A D 
Subjt:  MANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTL----SRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRR-NFQPKPSRFCN--AASDH

Query:  RLEVS
        RL VS
Subjt:  RLEVS

A0A5B7BSA6 Uncharacterized protein (Fragment)3.5e-1650.41Show/hide
Query:  LNSEGERVVQVKTPKINSVILIGSYNFPSPMANKTASSS---RLCLCAPTSHPGSFRCSLHRRPRKASDKTT--LSRGSQSKAATATSTATGLFKVFLMQ
        LN++G  +  +K P+ N +         + MA++ +SSS   R CLC+PT+HPGSFRCSLHR  RK S ++T  ++R   SK  + TS    L K FLM 
Subjt:  LNSEGERVVQVKTPKINSVILIGSYNFPSPMANKTASSS---RLCLCAPTSHPGSFRCSLHRRPRKASDKTT--LSRGSQSKAATATSTATGLFKVFLMQ

Query:  AIKPSSHDL-RRRNFQPKPSRFC
         IKPSSHDL RRRNFQPKP+RFC
Subjt:  AIKPSSHDL-RRRNFQPKPSRFC

A0A6J1DD51 uncharacterized protein LOC1110193811.5e-2269Show/hide
Query:  MANKT----ASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATS----TATGLFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCNAAS
        MA KT    AS+SRLCLCAPT+HPGSFRCSLHRRPRKASDK        SKAA A+       T L K FLMQ IKPSSHDL RRRNFQPKPSRFCN  S
Subjt:  MANKT----ASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATS----TATGLFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCNAAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein8.0e-0535.23Show/hide
Query:  NSEGERVVQVKTPKINSVILIGSYNFPSPMANKTASSSRLCLCAPTSHPGSFRCSLHRR---PRKASDKTTLSRGSQSKAATATSTAT
        N++G   V++ +   NS + +GS      ++ +T+ +   CLC+PT+HPGSFRC +HR     R  S +      S  K A + STAT
Subjt:  NSEGERVVQVKTPKINSVILIGSYNFPSPMANKTASSSRLCLCAPTSHPGSFRCSLHRR---PRKASDKTTLSRGSQSKAATATSTAT

AT5G11090.1 serine-rich protein-related1.3e-0737.5Show/hide
Query:  SRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKV----------FLMQAIKPSSHDLRRR-NFQPKPSR
        SR C+C+PT+HPGSFRCSLH+       + T S  +       ++    L ++           L   I+PSSH L+RR  +QP+PSR
Subjt:  SRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKV----------FLMQAIKPSSHDLRRR-NFQPKPSR

AT5G20370.1 serine-rich protein-related5.0e-0734.17Show/hide
Query:  GSYNFPSPM-ANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKT----TLSRGSQSKAATATSTATGLFKVFLMQAI--------------------
        GS   PS +  +    + R CLC+PT+HPGSFRCS HRR      KT    T+ R ++       +    L K+ LM ++                    
Subjt:  GSYNFPSPM-ANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKT----TLSRGSQSKAATATSTATGLFKVFLMQAI--------------------

Query:  KPSS-HDLRRRNFQPKPSRF
        KPSS H  RR  F+P+ SRF
Subjt:  KPSS-HDLRRRNFQPKPSRF

AT5G25280.1 serine-rich protein-related5.0e-0732.99Show/hide
Query:  NKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKV----------FLMQAIKPSSHDLRRRN-FQPKPSRFCN
        +K   S R C+C+PT+HPGSFRCSLH+       + T S  +       ++    L ++           L   I+PSSH L+RR+ ++P+ SR  +
Subjt:  NKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKV----------FLMQAIKPSSHDLRRRN-FQPKPSRFCN

AT5G25280.2 serine-rich protein-related5.0e-0732.99Show/hide
Query:  NKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKV----------FLMQAIKPSSHDLRRRN-FQPKPSRFCN
        +K   S R C+C+PT+HPGSFRCSLH+       + T S  +       ++    L ++           L   I+PSSH L+RR+ ++P+ SR  +
Subjt:  NKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKV----------FLMQAIKPSSHDLRRRN-FQPKPSRFCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGTGTGGGCTGCAAAAAGCCAAGCGTAACCCGGTATGCACCCGAGTATTGCTCTCAAGTTATTGAATCATCGACCTATGCCCCAAGATGGCAAACATCACCAAG
ACGAGGGACAACCAAACAGCCCCTGCAGGTTACGGCTACAGTCGCAAGAAGCGAGGACAAGTTAGGGAAAAAAGTGGAAGTAAATTACAAATTTACCCCTCCTACGAAGC
TTAATTCCGAGGGGGAAAGAGTTGTACAAGTAAAAACGCCGAAAATTAATTCAGTCATTCTCATAGGCAGTTACAACTTCCCGTCTCCAATGGCGAACAAAACCGCTTCC
TCTTCCCGCCTCTGTCTCTGTGCTCCGACCTCCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGTCGTCCCCGGAAGGCATCCGACAAAACGACGCTGTCGCGTGGAAG
CCAATCGAAGGCTGCCACTGCCACTTCCACGGCGACCGGTCTCTTTAAAGTGTTTCTGATGCAGGCCATCAAGCCTTCGAGTCACGATCTTCGGAGGAGGAACTTCCAGC
CTAAACCCTCCCGATTCTGCAATGCCGCTTCTGATCATCGCTTGGAAGTTTCTTCATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGTGTGGGCTGCAAAAAGCCAAGCGTAACCCGGTATGCACCCGAGTATTGCTCTCAAGTTATTGAATCATCGACCTATGCCCCAAGATGGCAAACATCACCAAG
ACGAGGGACAACCAAACAGCCCCTGCAGGTTACGGCTACAGTCGCAAGAAGCGAGGACAAGTTAGGGAAAAAAGTGGAAGTAAATTACAAATTTACCCCTCCTACGAAGC
TTAATTCCGAGGGGGAAAGAGTTGTACAAGTAAAAACGCCGAAAATTAATTCAGTCATTCTCATAGGCAGTTACAACTTCCCGTCTCCAATGGCGAACAAAACCGCTTCC
TCTTCCCGCCTCTGTCTCTGTGCTCCGACCTCCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGTCGTCCCCGGAAGGCATCCGACAAAACGACGCTGTCGCGTGGAAG
CCAATCGAAGGCTGCCACTGCCACTTCCACGGCGACCGGTCTCTTTAAAGTGTTTCTGATGCAGGCCATCAAGCCTTCGAGTCACGATCTTCGGAGGAGGAACTTCCAGC
CTAAACCCTCCCGATTCTGCAATGCCGCTTCTGATCATCGCTTGGAAGTTTCTTCATCGTGA
Protein sequenceShow/hide protein sequence
MVGVGCKKPSVTRYAPEYCSQVIESSTYAPRWQTSPRRGTTKQPLQVTATVARSEDKLGKKVEVNYKFTPPTKLNSEGERVVQVKTPKINSVILIGSYNFPSPMANKTAS
SSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATGLFKVFLMQAIKPSSHDLRRRNFQPKPSRFCNAASDHRLEVSSS