; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09611 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09611
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box/LRR-repeat protein 2
Genome locationCarg_Chr17:7071469..7071906
RNA-Seq ExpressionCarg09611
SyntenyCarg09611
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575619.1 EIN3-binding F-box protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2158.33Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG   LRK      SLVTDKSLIDLSTK       
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------

Query:  -----------HVCQGPAPNPNLSSLSANLIG
                    + +    NPNLSSLSAN IG
Subjt:  -----------HVCQGPAPNPNLSSLSANLIG

KAG7014163.1 hypothetical protein SDJN02_24337, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-60100Show/hide
Query:  MRNLRVLLCSKLGVLTDDDLLFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQGKSLRKSLVTDKSLIDLSTKHVCQGPAPNPNLSSLSANL
        MRNLRVLLCSKLGVLTDDDLLFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQGKSLRKSLVTDKSLIDLSTKHVCQGPAPNPNLSSLSANL
Subjt:  MRNLRVLLCSKLGVLTDDDLLFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQGKSLRKSLVTDKSLIDLSTKHVCQGPAPNPNLSSLSANL

Query:  IGDSLSKFRCLSIRFLSMEKI
        IGDSLSKFRCLSIRFLSMEKI
Subjt:  IGDSLSKFRCLSIRFLSMEKI

KAG7014170.1 EIN3-binding F-box protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2158.33Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG   LRK      SLVTDKSLIDLSTK       
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------

Query:  -----------HVCQGPAPNPNLSSLSANLIG
                    + +    NPNLSSLSAN IG
Subjt:  -----------HVCQGPAPNPNLSSLSANLIG

XP_022953782.1 F-box/LRR-repeat protein 4 [Cucurbita moschata]1.5e-2158.33Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG   LRK      SLVTDKSLIDLSTK       
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------

Query:  -----------HVCQGPAPNPNLSSLSANLIG
                    + +    NPNLSSLSAN IG
Subjt:  -----------HVCQGPAPNPNLSSLSANLIG

XP_023548543.1 F-box/LRR-repeat protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]1.5e-2158.33Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG   LRK      SLVTDKSLIDLSTK       
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------

Query:  -----------HVCQGPAPNPNLSSLSANLIG
                    + +    NPNLSSLSAN IG
Subjt:  -----------HVCQGPAPNPNLSSLSANLIG

TrEMBL top hitse value%identityAlignment
A0A6J1CTK7 SCF E3 ubiquitin ligase complex F-box protein grrA2.1e-0849.45Show/hide
Query:  MRNLRVLLCSKLGVLTDDDLL-----FPNLEDLDISYPMNPLAPSCYMILRIRD---FRFDSGPAATSQGKSLRKSLVTDKSLIDLSTKHV
        MRNLRVLLCSK+G L DDDL+     FPNLE+LDISYP N LA  C     + D   F    G     +      S ++DKSL+DLST  V
Subjt:  MRNLRVLLCSKLGVLTDDDLL-----FPNLEDLDISYPMNPLAPSCYMILRIRD---FRFDSGPAATSQGKSLRKSLVTDKSLIDLSTKHV

A0A6J1GP68 F-box/LRR-repeat protein 47.5e-2258.33Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG   LRK      SLVTDKSLIDLSTK       
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------

Query:  -----------HVCQGPAPNPNLSSLSANLIG
                    + +    NPNLSSLSAN IG
Subjt:  -----------HVCQGPAPNPNLSSLSANLIG

A0A6J1JM33 uncharacterized protein LOC111488119 isoform X21.3e-1371.64Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG

A0A6J1JR02 F-box/LRR-repeat protein 2-like isoform X16.3e-2157.58Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG   L K      SLVTDKSLIDLSTK       
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG-KSLRK------SLVTDKSLIDLSTK-------

Query:  -----------HVCQGPAPNPNLSSLSANLIG
                    + +    NPNLSSLSAN IG
Subjt:  -----------HVCQGPAPNPNLSSLSANLIG

A0A6J1JWH7 uncharacterized protein LOC111488119 isoform X31.3e-1371.64Show/hide
Query:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG
        MRNLRVLLCSKLGVLTDDDL     LFPNLEDLDISYPMNPLAPSCY  +       DSG  A  QG
Subjt:  MRNLRVLLCSKLGVLTDDDL-----LFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAATTTGAGGGTTTTGCTGTGCTCGAAGCTTGGGGTTCTGACTGACGACGATCTGTTGTTTCCGAATCTTGAAGATCTCGATATTAGCTATCCTATGAATCCTCT
CGCTCCCAGTTGTTATATGATATTACGGATTCGGGATTTTCGCTTTGATTCAGGGCCTGCCGCGACTTCGCAAGGTAAATCTCTCAGGAAATCTCTCGTTACTGATAAGT
CGCTTATAGATTTATCAACGAAACATGTATGCCAAGGCCCTGCGCCAAACCCTAATTTGAGTTCACTCTCCGCAAATTTGATAGGAGATTCCCTCTCTAAATTCAGATGC
TTATCGATTCGTTTCTTGTCTATGGAAAAAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAATTTGAGGGTTTTGCTGTGCTCGAAGCTTGGGGTTCTGACTGACGACGATCTGTTGTTTCCGAATCTTGAAGATCTCGATATTAGCTATCCTATGAATCCTCT
CGCTCCCAGTTGTTATATGATATTACGGATTCGGGATTTTCGCTTTGATTCAGGGCCTGCCGCGACTTCGCAAGGTAAATCTCTCAGGAAATCTCTCGTTACTGATAAGT
CGCTTATAGATTTATCAACGAAACATGTATGCCAAGGCCCTGCGCCAAACCCTAATTTGAGTTCACTCTCCGCAAATTTGATAGGAGATTCCCTCTCTAAATTCAGATGC
TTATCGATTCGTTTCTTGTCTATGGAAAAAATCTAA
Protein sequenceShow/hide protein sequence
MRNLRVLLCSKLGVLTDDDLLFPNLEDLDISYPMNPLAPSCYMILRIRDFRFDSGPAATSQGKSLRKSLVTDKSLIDLSTKHVCQGPAPNPNLSSLSANLIGDSLSKFRC
LSIRFLSMEKI