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Carg09612 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09612
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box/LRR-repeat protein 4
Genome locationCarg_Chr17:7071966..7072861
RNA-Seq ExpressionCarg09612
SyntenyCarg09612
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014164.1 hypothetical protein SDJN02_24338, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-78100Show/hide
Query:  MFAIKENSFLSHCHDFSFSGILKKKATQQILSTLKLYLWIYLGTRICAMMLLIFNISNDWSRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISFVIP
        MFAIKENSFLSHCHDFSFSGILKKKATQQILSTLKLYLWIYLGTRICAMMLLIFNISNDWSRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISFVIP
Subjt:  MFAIKENSFLSHCHDFSFSGILKKKATQQILSTLKLYLWIYLGTRICAMMLLIFNISNDWSRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISFVIP

Query:  WDGYVEAISEGDNSPNFIFPTAKIKGAFSCAMDVWSTLMGFRWI
        WDGYVEAISEGDNSPNFIFPTAKIKGAFSCAMDVWSTLMGFRWI
Subjt:  WDGYVEAISEGDNSPNFIFPTAKIKGAFSCAMDVWSTLMGFRWI
KAG7014170.1 EIN3-binding F-box protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-0849.35Show/hide
Query:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
        SRCPSLIHLDLLGC +     VKEVV   +GLREIS          VIPW  +          PNFIFPTA  +  F
Subjt:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
XP_022953782.1 F-box/LRR-repeat protein 4 [Cucurbita moschata]4.0e-0849.35Show/hide
Query:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
        SRCPSLIHLDLLGC +     VKEVV   +GLREIS          VIPW  +          PNFIFPTA  +  F
Subjt:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
XP_022991531.1 F-box/LRR-repeat protein 2-like isoform X1 [Cucurbita maxima]8.0e-0950.65Show/hide
Query:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
        SRCPSLIHLDLLGCF+     VKEVV   +GLREIS          VIPW  +          PNFIFPTA  +  F
Subjt:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
XP_023548543.1 F-box/LRR-repeat protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]4.0e-0849.35Show/hide
Query:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
        SRCPSLIHLDLLGC +     VKEVV   +GLREIS          VIPW  +          PNFIFPTA  +  F
Subjt:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
TrEMBL top hitse value%identityAlignment
A0A6J1CTK7 SCF E3 ubiquitin ligase complex F-box protein grrA8.3e-0438.16Show/hide
Query:  RCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
        RCPSLIHLDLLGC +     VKEVV   + LREI+          ++PW  +         +PN + PT   +  F
Subjt:  RCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
A0A6J1GP68 F-box/LRR-repeat protein 41.9e-0849.35Show/hide
Query:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
        SRCPSLIHLDLLGC +     VKEVV   +GLREIS          VIPW  +          PNFIFPTA  +  F
Subjt:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
A0A6J1JR02 F-box/LRR-repeat protein 2-like isoform X13.9e-0950.65Show/hide
Query:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
        SRCPSLIHLDLLGCF+     VKEVV   +GLREIS          VIPW  +          PNFIFPTA  +  F
Subjt:  SRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISF---------VIPWDGYVEAISEGDNSPNFIFPTAKIKGAF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCCATTAAAGAAAACTCGTTTCTTTCCCACTGCCATGACTTCTCGTTTTCTGGAATTTTAAAGAAGAAGGCCACCCAACAGATTTTGTCAACCCTTAAACTATA
TCTCTGGATCTATCTGGGAACAAGAATTTGTGCAATGATGCTATTGATATTCAACATTAGCAATGATTGGAGCAGATGCCCTTCTCTGATCCATTTAGATTTGTTGGGAT
GCTTTGAAAGTGACGGCAGAAGGGTGAAGGAGGTGGTTGCGAAATTGCAGGGATTGAGGGAAATTAGCTTTGTTATTCCATGGGATGGTTATGTCGAGGCGATCTCTGAG
GGAGATAATTCTCCCAATTTTATCTTTCCTACTGCTAAAATCAAAGGAGCCTTTTCTTGCGCCATGGATGTCTGGTCCACGCTGATGGGTTTTCGTTGGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCCATTAAAGAAAACTCGTTTCTTTCCCACTGCCATGACTTCTCGTTTTCTGGAATTTTAAAGAAGAAGGCCACCCAACAGATTTTGTCAACCCTTAAACTATA
TCTCTGGATCTATCTGGGAACAAGAATTTGTGCAATGATGCTATTGATATTCAACATTAGCAATGATTGGAGCAGATGCCCTTCTCTGATCCATTTAGATTTGTTGGGAT
GCTTTGAAAGTGACGGCAGAAGGGTGAAGGAGGTGGTTGCGAAATTGCAGGGATTGAGGGAAATTAGCTTTGTTATTCCATGGGATGGTTATGTCGAGGCGATCTCTGAG
GGAGATAATTCTCCCAATTTTATCTTTCCTACTGCTAAAATCAAAGGAGCCTTTTCTTGCGCCATGGATGTCTGGTCCACGCTGATGGGTTTTCGTTGGATCTAA
Protein sequenceShow/hide protein sequence
MFAIKENSFLSHCHDFSFSGILKKKATQQILSTLKLYLWIYLGTRICAMMLLIFNISNDWSRCPSLIHLDLLGCFESDGRRVKEVVAKLQGLREISFVIPWDGYVEAISE
GDNSPNFIFPTAKIKGAFSCAMDVWSTLMGFRWI