; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09634 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09634
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2H2-like zinc finger protein
Genome locationCarg_Chr14:3757888..3758415
RNA-Seq ExpressionCarg09634
SyntenyCarg09634
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581122.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]6.1e-8896.67Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP TTTTTTTHHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSAN-----TTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSAN     TTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSAN-----TTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

KAG7017856.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-90100Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

XP_022934585.1 protein LATE FLOWERING-like [Cucurbita moschata]1.8e-7993.14Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP   TTTTTHHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAP+PTP P    TPAPADFLGQHWFNQNHYSANTTTT   ASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

XP_022983390.1 protein LATE FLOWERING-like [Cucurbita maxima]4.1e-7690.86Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPP P    TTTT THHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAPAPTP      TPAPADFLGQHWFNQNHYSANTTTTTT   ASASASPDALSPN DTAVEHVTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

XP_023529006.1 protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]3.6e-8092Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSA KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP     TT HHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTV PAPTP PTPTTTPAPADFLGQHWFNQNHYSANTTTTTT  + +ASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A6J1DQT0 zinc finger protein 69.1e-3760.67Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFL+QTTT     PK SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F S++LH        PP        HH L  
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPA-PADFLGQHW--FNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        P        P P P+ +PA  A FL +HW   +QNH+         AA +SAS   DALSPNAD AVE+VTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPA-PADFLGQHW--FNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like2.7e-4968.33Show/hide
Query:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTTTTH
        MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL    PPPPPP      TT+
Subjt:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTTTTH

Query:  HHLPQPYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        HHL  P T A AP+ +              +HWF+QN++   TTTT       ASASP+ LSPNAD AVEHVTIDLTLRL
Subjt:  HHLPQPYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like8.7e-8093.14Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP   TTTTTHHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAP+PTP P    TPAPADFLGQHWFNQNHYSANTTTT   ASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like2.0e-7690.86Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPP P    TTTT THHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQ

Query:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAPAPTP      TPAPADFLGQHWFNQNHYSANTTTTTT   ASASASPDALSPN DTAVEHVTIDLTLRL
Subjt:  PYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like2.7e-4968.33Show/hide
Query:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTTTTH
        MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F SEILHLGSL    PPPPPP      TT+
Subjt:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTTTTH

Query:  HHLPQPYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL
        HHL  P   A AP+ +              +HWF+QN++   TTTT     ASASASP+ LSPNAD AVEHVTIDLTLRL
Subjt:  HHLPQPYTVAPAPTPIPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 45.9e-0951.67Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++T+ +S P+  ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q39266 Zinc finger protein 73.5e-0945.83Show/hide
Query:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYT
        ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +              HHH P  YT
Subjt:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYT

Q42485 Zinc finger protein 11.3e-0845.83Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP
        L  +   S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++    + + L SLP
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP

Q9FFX4 Zinc finger protein KNUCKLES9.7e-1251.22Show/hide
Query:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP
        P+   F+    T S S+ + S    +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L   PP
Subjt:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP

Q9FKA9 Protein LATE FLOWERING3.5e-0943.56Show/hide
Query:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTTTTHHHL-----PQPYTVAPAPTPI
        K + K     SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A     F +    L +LP         ++ + HHL     P   +VA  PT  
Subjt:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTTTTHHHL-----PQPYTVAPAPTPI

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 72.5e-1045.83Show/hide
Query:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYT
        ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +              HHH P  YT
Subjt:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYT

AT1G66140.1 zinc finger protein 44.2e-1051.67Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++T+ +S P+  ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

AT1G80730.1 zinc-finger protein 19.4e-1045.83Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP
        L  +   S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++    + + L SLP
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein6.9e-1351.22Show/hide
Query:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP
        P+   F+    T S S+ + S    +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L   PP
Subjt:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP

AT5G48890.1 C2H2-like zinc finger protein2.5e-1043.56Show/hide
Query:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTTTTHHHL-----PQPYTVAPAPTPI
        K + K     SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A     F +    L +LP         ++ + HHL     P   +VA  PT  
Subjt:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTTTTHHHL-----PQPYTVAPAPTPI

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCCAGCCATTTACGACTTCCTTACCCAAACAACAACCGCTTCAAATTCTGCACCCAAAGCTTCCAGAAAGTTCCAGTCTCAATACTCTTCCTCTCGCATTTT
TCCGTGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAAAGAGCCGCCTCTCGTAAGGCTTTCGCCTCTGAAA
TTCTTCATCTCGGTTCGCTTCCGCCGCCGCCGCCGCCGACGACGACGACGACGACGACGACTCACCACCATCTTCCGCAGCCTTACACGGTTGCTCCAGCTCCGACTCCG
ATTCCGACTCCGACTACGACTCCGGCTCCGGCTGATTTTCTCGGCCAGCATTGGTTTAATCAGAATCACTACAGTGCTAACACCACCACCACCACCACCGCTGCCTCCGC
CTCCGCCTCCGCCTCGCCGGATGCTCTCTCTCCGAACGCCGATACCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCCAGCCATTTACGACTTCCTTACCCAAACAACAACCGCTTCAAATTCTGCACCCAAAGCTTCCAGAAAGTTCCAGTCTCAATACTCTTCCTCTCGCATTTT
TCCGTGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAAAGAGCCGCCTCTCGTAAGGCTTTCGCCTCTGAAA
TTCTTCATCTCGGTTCGCTTCCGCCGCCGCCGCCGCCGACGACGACGACGACGACGACGACTCACCACCATCTTCCGCAGCCTTACACGGTTGCTCCAGCTCCGACTCCG
ATTCCGACTCCGACTACGACTCCGGCTCCGGCTGATTTTCTCGGCCAGCATTGGTTTAATCAGAATCACTACAGTGCTAACACCACCACCACCACCACCGCTGCCTCCGC
CTCCGCCTCCGCCTCGCCGGATGCTCTCTCTCCGAACGCCGATACCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA
Protein sequenceShow/hide protein sequence
MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYTVAPAPTP
IPTPTTTPAPADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL