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Carg09659 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09659
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:3649143..3651503
RNA-Seq ExpressionCarg09659
SyntenyCarg09659
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017831.1 hypothetical protein SDJN02_19697 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-58100Show/hide
Query:  MATAIFPTLAEAPRSFDGKKWIVGLSGMIQSQTSGYVPVRILSPEGGGHEAKGMDWGSHIDWRRERVPARTLGPNGGGSKDPTLVVEANNVQSTRLDMGY
        MATAIFPTLAEAPRSFDGKKWIVGLSGMIQSQTSGYVPVRILSPEGGGHEAKGMDWGSHIDWRRERVPARTLGPNGGGSKDPTLVVEANNVQSTRLDMGY
Subjt:  MATAIFPTLAEAPRSFDGKKWIVGLSGMIQSQTSGYVPVRILSPEGGGHEAKGMDWGSHIDWRRERVPARTLGPNGGGSKDPTLVVEANNVQSTRLDMGY

Query:  SILLLSSGLIDVED
        SILLLSSGLIDVED
Subjt:  SILLLSSGLIDVED
KAG7031312.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-0552.73Show/hide
Query:  TSGYVPVRILSPEGG---------GHEAKGMDWGSHIDWRRERVPARTLGPNGGG
        +S  V  R L+PEG              +G+DWGSHIDWRRERV  RTLGP GGG
Subjt:  TSGYVPVRILSPEGG---------GHEAKGMDWGSHIDWRRERVPARTLGPNGGG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCGATTTTCCCGACATTGGCCGAAGCCCCCCGTTCCTTTGATGGGAAGAAATGGATTGTGGGTCTGTCGGGGATGATACAGAGCCAAACATCGGGCTATGT
GCCAGTGAGGATACTAAGCCCCGAAGGGGGTGGACATGAGGCAAAGGGGATGGATTGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGCCAGCAAGAACATTGGGTC
CCAATGGGGGTGGATCGAAAGATCCCACATTGGTTGTAGAGGCTAACAATGTGCAATCAACAAGGCTTGATATGGGTTACAGCATTTTGTTATTGAGCTCGGGATTGATC
GATGTAGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
CATTGTTGGACCATTTCTACCTCTCCTTCTGGCCATGGCGACGGCGATTTTCCCGACATTGGCCGAAGCCCCCCGTTCCTTTGATGGGAAGAAATGGATTGTGGGTCTGT
CGGGGATGATACAGAGCCAAACATCGGGCTATGTGCCAGTGAGGATACTAAGCCCCGAAGGGGGTGGACATGAGGCAAAGGGGATGGATTGGGGGTCCCACATCGATTGG
AGAAGGGAACGAGTGCCAGCAAGAACATTGGGTCCCAATGGGGGTGGATCGAAAGATCCCACATTGGTTGTAGAGGCTAACAATGTGCAATCAACAAGGCTTGATATGGG
TTACAGCATTTTGTTATTGAGCTCGGGATTGATCGATGTAGAAGACTAG
Protein sequenceShow/hide protein sequence
MATAIFPTLAEAPRSFDGKKWIVGLSGMIQSQTSGYVPVRILSPEGGGHEAKGMDWGSHIDWRRERVPARTLGPNGGGSKDPTLVVEANNVQSTRLDMGYSILLLSSGLI
DVED