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Carg09686 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09686
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF1713 domain-containing protein
Genome locationCarg_Chr14:3529975..3530367
RNA-Seq ExpressionCarg09686
SyntenyCarg09686
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsIPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]8.7e-5587.69Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEPD VEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
KAG7017804.1 hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-64100Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022934588.1 uncharacterized protein LOC111441723 [Cucurbita moschata]7.8e-6499.23Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEP+FVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022984015.1 uncharacterized protein LOC111482461 [Cucurbita maxima]4.8e-6196.92Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQKLVRKS PTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTS+ SHF LFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_023526336.1 uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo]7.8e-6499.23Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQD+SRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
TrEMBL top hitse value%identityAlignment
A0A0A0LDP0 DUF1713 domain-containing protein4.2e-5587.69Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEPD VEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A5A7UNU9 DUF1713 domain-containing protein5.1e-5386.15Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQKL+RKSPP+RLIAALG QTSQN   P+ILHQPLDFDKK D H  SNLNS STSNPS FS FYPSFPFG CLPQISS+G+LPFEPD+VEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1EJL0 uncharacterized protein LOC1114351913.7e-5183.08Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MAS+LQKL+RKSPPTR IAAL +QTSQN   PYILHQPLD D+KPD HCDSNLN+VSTSNPS FSLF+PSFPFG CL QISS+G + FEPD+VE DDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1F832 uncharacterized protein LOC1114417233.8e-6499.23Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEP+FVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1J7I5 uncharacterized protein LOC1114824612.3e-6196.92Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
        MASMLQKLVRKS PTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTS+ SHF LFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63150.1 unknown protein7.2e-0734.78Show/hide
Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFD---KKPDRHCDSN-LNSVSTSNPSHFSLFYPSFPFGFCL-PQISSSGMLPFEPDFVEQ
        MA+++ + +R       I  L T  S    +    +   + D   +KPD    +N L ++S +  +    FYPSF  G CL P++     L       E+
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFD---KKPDRHCDSN-LNSVSTSNPSHFSLFYPSFPFGFCL-PQISSSGMLPFEPDFVEQ

Query:  DDSRK---LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        ++  K   ++ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  DDSRK---LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATGCTTCAAAAGCTCGTCAGAAAATCGCCACCAACAAGACTAATTGCTGCTTTGGGTACCCAGACCTCACAAAATCCCTTAAAACCCTACATTCTTCACCA
GCCGCTTGATTTTGATAAGAAACCAGATCGGCATTGCGATTCTAATTTGAACTCTGTTTCTACTTCGAATCCATCTCACTTTTCCCTGTTTTACCCTAGTTTTCCATTTG
GGTTTTGCTTGCCGCAAATCTCCTCATCTGGGATGCTTCCGTTCGAGCCCGATTTTGTTGAACAAGATGATTCTAGGAAATTGTGGGCTGATAGCGTGAAGAAGAAGAGG
AAACGGAAGATGAACAAGCATAAGTACAAGAAGCTTAGGAAGCGACTCCGAAGACAGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGATGCTTCAAAAGCTCGTCAGAAAATCGCCACCAACAAGACTAATTGCTGCTTTGGGTACCCAGACCTCACAAAATCCCTTAAAACCCTACATTCTTCACCA
GCCGCTTGATTTTGATAAGAAACCAGATCGGCATTGCGATTCTAATTTGAACTCTGTTTCTACTTCGAATCCATCTCACTTTTCCCTGTTTTACCCTAGTTTTCCATTTG
GGTTTTGCTTGCCGCAAATCTCCTCATCTGGGATGCTTCCGTTCGAGCCCGATTTTGTTGAACAAGATGATTCTAGGAAATTGTGGGCTGATAGCGTGAAGAAGAAGAGG
AAACGGAAGATGAACAAGCATAAGTACAAGAAGCTTAGGAAGCGACTCCGAAGACAGACTTAG
Protein sequenceShow/hide protein sequence
MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRKLWADSVKKKR
KRKMNKHKYKKLRKRLRRQT