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Carg09717 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09717
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c oxidase subunit 5C
Genome locationCarg_Chr14:3347780..3350184
RNA-Seq ExpressionCarg09717
SyntenyCarg09717
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017774.1 putative cytochrome c oxidase subunit 5C-4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-93100Show/hide
Query:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTIDTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQ
        MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTIDTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQ
Subjt:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTIDTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQ

Query:  DLLEAPQGFKNGGCSGMETFLSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI
        DLLEAPQGFKNGGCSGMETFLSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI
Subjt:  DLLEAPQGFKNGGCSGMETFLSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI

XP_022935291.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata]8.7e-21100Show/hide
Query:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Subjt:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

XP_022983411.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima]5.6e-2096.08Show/hide
Query:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        MVG+VVYKGPS IKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Subjt:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

XP_023528587.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita pepo subsp. pepo]1.9e-2098.04Show/hide
Query:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        MVG+VVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Subjt:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

XP_038906018.1 putative cytochrome c oxidase subunit 5C-4 [Benincasa hispida]1.2e-1788.46Show/hide
Query:  MVGSVV-YKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        MVG V  YKGPS+IKEIIYGVG+GLMAGGLWKMHHWNYQR+TKEFYELLDRG
Subjt:  MVGSVV-YKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

TrEMBL top hitse value%identityAlignment
A0A087GTA8 Cytochrome c oxidase subunit 5C7.7e-1572Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +G  VYKGPS++KEIIYG+ +GL AGGLWKMHHWN QRRT+EFY+LL++G
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

A0A5J5C3H0 Uncharacterized protein1.2e-1578Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +G   Y GPSV+KEIIYGV +GLMAGGLWKMHHWNYQRRTKEFY+LL++G
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

A0A6J1F554 putative cytochrome c oxidase subunit 5C-44.2e-21100Show/hide
Query:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Subjt:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

A0A6J1IZ83 putative cytochrome c oxidase subunit 5C-42.7e-2096.08Show/hide
Query:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        MVG+VVYKGPS IKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Subjt:  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

D7MJ92 Cytochrome c oxidase subunit 5C1.3e-1474Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +G  VYKGPSV+KEIIYG+ +GL  GGLWKMHHWN QRRTKEFY+LL++G
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

SwissProt top hitse value%identityAlignment
O22912 Probable cytochrome c oxidase subunit 5C-16.9e-1362Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        V     KGPSV+KE+  G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

P19173 Cytochrome c oxidase subunit 5C4.3e-1566Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        V  +VYKGPSV+KE++ G  +GL+AGG WKMHHWN QRRTKEFY++L++G
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

Q9FLK2 Probable cytochrome c oxidase subunit 5C-39.1e-1360Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

Q9FNE0 Putative cytochrome c oxidase subunit 5C-41.0e-1672Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +G  VYKGPSV+KEIIYG+ +G   GGLWKMHHWN QRRTKEFY+LL++G
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

Q9LZQ0 Cytochrome c oxidase subunit 5C-24.1e-1364Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        V     KGPSV+KE+I G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein4.9e-1462Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        V     KGPSV+KE+  G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

AT5G40382.1 Cytochrome c oxidase subunit Vc family protein7.4e-1872Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +G  VYKGPSV+KEIIYG+ +G   GGLWKMHHWN QRRTKEFY+LL++G
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein6.4e-1460Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein6.4e-1460Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein6.4e-1460Show/hide
Query:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
        +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Subjt:  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTA
CCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAG
AAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAA
AATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTCATGCAAAAGC
AGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTA
CCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAG
AAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAA
AATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTCATGCAAAAGC
AGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG
Protein sequenceShow/hide protein sequence
MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTIDTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQDLLEAPQGFK
NGGCSGMETFLSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI