; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09774 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09774
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110426669
Genome locationCarg_Chr14:2998744..2999482
RNA-Seq ExpressionCarg09774
SyntenyCarg09774
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580978.1 putative pectate lyase P59, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4871.18Show/hide
Query:  IKSGRPEEDEQLHFILFGKLLQIPLSFQWVLVGIGNRTLNMPTTTSSALAAGAILFLFIIVSAASAPILLVMDRRCLVMGFVLWQRCTAGRKYVGSVTYT
        ++SG P +         GKLLQIPLSFQWVLVGIGN TLNMPTTTSSALAAGAILFLFIIVSAASAPILLVMDRRCL M  V     +       S+  T
Subjt:  IKSGRPEEDEQLHFILFGKLLQIPLSFQWVLVGIGNRTLNMPTTTSSALAAGAILFLFIIVSAASAPILLVMDRRCLVMGFVLWQRCTAGRKYVGSVTYT

Query:  LSLELDVLNSVAAHGGDRNKLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
        L L + V+          NKLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
Subjt:  LSLELDVLNSVAAHGGDRNKLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC

KAG6588383.1 F-box/WD repeat-containing protein sel-10, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1047.87Show/hide
Query:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
        S+  +++  +DVLNSVAAHGGDRN                   KLDKV+SAMSHFDFEMALYY+RSSDHD         ++ N  Q L  +L C
Subjt:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC

KAG7017717.1 hypothetical protein SDJN02_19583, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-100100Show/hide
Query:  MKNKNKLMGERAAKMENLTKPAEGIKSGRPEEDEQLHFILFGKLLQIPLSFQWVLVGIGNRTLNMPTTTSSALAAGAILFLFIIVSAASAPILLVMDRRC
        MKNKNKLMGERAAKMENLTKPAEGIKSGRPEEDEQLHFILFGKLLQIPLSFQWVLVGIGNRTLNMPTTTSSALAAGAILFLFIIVSAASAPILLVMDRRC
Subjt:  MKNKNKLMGERAAKMENLTKPAEGIKSGRPEEDEQLHFILFGKLLQIPLSFQWVLVGIGNRTLNMPTTTSSALAAGAILFLFIIVSAASAPILLVMDRRC

Query:  LVMGFVLWQRCTAGRKYVGSVTYTLSLELDVLNSVAAHGGDRNKLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
        LVMGFVLWQRCTAGRKYVGSVTYTLSLELDVLNSVAAHGGDRNKLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
Subjt:  LVMGFVLWQRCTAGRKYVGSVTYTLSLELDVLNSVAAHGGDRNKLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC

XP_023531074.1 uncharacterized protein LOC111793435 [Cucurbita pepo subsp. pepo]2.0e-1047.87Show/hide
Query:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
        S+  +++  +DVLNSVAAHGGDRN                   KLDKV+SAMSHFDFEMALYY+RSSDHD         ++ N  Q L  +L C
Subjt:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC

XP_038904794.1 uncharacterized protein LOC120091059 [Benincasa hispida]1.1e-1048.54Show/hide
Query:  AGRKYVGSVTYTLSL--ELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEA
        AGR+ +   T   S+   +DVLNSVAAHGGDRN                   KLDKV+SAMSHFDFEMALYYVRSSDHD         ++ N  Q L  +
Subjt:  AGRKYVGSVTYTLSL--ELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEA

Query:  LGC
        L C
Subjt:  LGC

TrEMBL top hitse value%identityAlignment
A0A067LM44 Uncharacterized protein1.4e-0948.78Show/hide
Query:  QRCTAGRKYV-GSVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHD
        QR  A R  +  S+ Y+++  +DVL S+  HGGDRN                   KLDK +SAMSHFDFEMALYY+RSSDHD
Subjt:  QRCTAGRKYV-GSVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHD

A0A1R3I9C6 Uncharacterized protein1.4e-0948.78Show/hide
Query:  QRCTAGRKY-VGSVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHD
        Q+  A R + + S+ Y+++  +DVL SV AHGGDRN                   KLDKV+SA+SHFDFEMALYY++SSDHD
Subjt:  QRCTAGRKY-VGSVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHD

A0A6J1DD54 uncharacterized protein LOC1110199494.7e-1055.71Show/hide
Query:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHD
        ++ ++++  +DVL+SVAAHGGDRN                   KLDKV+SAMSHFDFEMALYYVRSSDHD
Subjt:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHD

A0A6J1EKD6 uncharacterized protein LOC1114354523.6e-1046.81Show/hide
Query:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
        S+  +++  +DVLNSVAAHGGDRN                   KLDKV+SAMSHFDFEMAL+Y+RSSDHD         ++ N  Q L  +L C
Subjt:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC

A0A6J1I4D6 uncharacterized protein LOC1114695372.8e-1046.81Show/hide
Query:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC
        S+  +++  +DVLNSV+AHGGDRN                   KLDKV+SAMSHFDFEMALYY+RSSDHD         ++ N  Q L  +L C
Subjt:  SVTYTLSLELDVLNSVAAHGGDRN-------------------KLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28720.1 unknown protein8.2e-0738.57Show/hide
Query:  SVTYTLSLELDVLNSVAAHGGD-------------------RNKLDKVLSAMSHFDFEMALYYVRSSDHD
        S+  T++  +DV++S  A+GGD                   + KLDK +SA+SH +FEMAL+Y+RS+ HD
Subjt:  SVTYTLSLELDVLNSVAAHGGD-------------------RNKLDKVLSAMSHFDFEMALYYVRSSDHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACAAGAACAAGTTGATGGGTGAGAGAGCAGCGAAAATGGAGAACTTGACAAAACCAGCAGAGGGAATTAAAAGTGGAAGGCCTGAAGAAGACGAACAACTTCA
TTTCATTCTTTTCGGCAAATTGTTGCAAATTCCATTGTCCTTCCAATGGGTTCTCGTCGGAATCGGTAACAGAACCCTAAACATGCCGACCACCACCTCCTCTGCTTTGG
CTGCCGGCGCGATCCTCTTTCTGTTCATCATCGTTTCCGCCGCCTCGGCTCCGATCCTGTTGGTTATGGACCGGCGTTGTCTGGTCATGGGGTTCGTCCTTTGGCAACGT
TGCACGGCCGGCCGAAAGTATGTGGGGAGTGTCACCTACACACTTAGCTTGGAGCTCGATGTTCTTAACTCTGTGGCTGCACATGGTGGTGATAGAAATAAGCTAGACAA
AGTGCTGTCTGCAATGTCGCATTTCGACTTCGAGATGGCTTTGTATTATGTAAGATCTTCAGATCATGACTTTCAAGAACAAAAGAAAGCAATTTTGATGCTAATTAATG
GATTGCAGAGTTTAATTGAAGCATTAGGATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACAAGAACAAGTTGATGGGTGAGAGAGCAGCGAAAATGGAGAACTTGACAAAACCAGCAGAGGGAATTAAAAGTGGAAGGCCTGAAGAAGACGAACAACTTCA
TTTCATTCTTTTCGGCAAATTGTTGCAAATTCCATTGTCCTTCCAATGGGTTCTCGTCGGAATCGGTAACAGAACCCTAAACATGCCGACCACCACCTCCTCTGCTTTGG
CTGCCGGCGCGATCCTCTTTCTGTTCATCATCGTTTCCGCCGCCTCGGCTCCGATCCTGTTGGTTATGGACCGGCGTTGTCTGGTCATGGGGTTCGTCCTTTGGCAACGT
TGCACGGCCGGCCGAAAGTATGTGGGGAGTGTCACCTACACACTTAGCTTGGAGCTCGATGTTCTTAACTCTGTGGCTGCACATGGTGGTGATAGAAATAAGCTAGACAA
AGTGCTGTCTGCAATGTCGCATTTCGACTTCGAGATGGCTTTGTATTATGTAAGATCTTCAGATCATGACTTTCAAGAACAAAAGAAAGCAATTTTGATGCTAATTAATG
GATTGCAGAGTTTAATTGAAGCATTAGGATGTTGA
Protein sequenceShow/hide protein sequence
MKNKNKLMGERAAKMENLTKPAEGIKSGRPEEDEQLHFILFGKLLQIPLSFQWVLVGIGNRTLNMPTTTSSALAAGAILFLFIIVSAASAPILLVMDRRCLVMGFVLWQR
CTAGRKYVGSVTYTLSLELDVLNSVAAHGGDRNKLDKVLSAMSHFDFEMALYYVRSSDHDFQEQKKAILMLINGLQSLIEALGC