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Carg09831 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09831
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTF-B3 domain-containing protein
Genome locationCarg_Chr10:2997062..2997547
RNA-Seq ExpressionCarg09831
SyntenyCarg09831
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]1.8e-3858.99Show/hide
Query:  EEVAEVVAP---VVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLT
        E VA VVA      +P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L+PMFN DE  + GI VTVY+ EGR+YDM F+LW SKLYVLT
Subjt:  EEVAEVVAP---VVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLT

Query:  KGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAG
        K W  FY  N LT P  ++TLWMFRHV  HK+CFA+  G
Subjt:  KGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAG

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]8.2e-8799.38Show/hide
Query:  MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGR
        MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGR
Subjt:  MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGR

Query:  QYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP
        QYDMQFKLWASKLYVLTKGWNDFYKTNNLT+PGLYVTLWMFRHVETHKICFAVTAGQFGEP
Subjt:  QYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-87100Show/hide
Query:  MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGR
        MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGR
Subjt:  MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGR

Query:  QYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP
        QYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP
Subjt:  QYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]2.0e-4064Show/hide
Query:  PALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEP
        P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT+P
Subjt:  PALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEP

Query:  GLYVTLWMFRHVETHKICFAVTAGQ
        G ++++WMFRHV T K+CFA+  GQ
Subjt:  GLYVTLWMFRHVETHKICFAVTAGQ

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]2.8e-3955.84Show/hide
Query:  NEAPSINGDEDVALEV--EEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQY
        NEA   N +E+VA+ V   +   V      P +AVI NIIG  SPP+ K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI VTVY+ EGR+Y
Subjt:  NEAPSINGDEDVALEV--EEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQY

Query:  DMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAG
        DM FK W SKLYVLTK WN FYK+NNLT PG ++++WMFRHV   K+CFA+  G
Subjt:  DMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAG

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein9.5e-4164Show/hide
Query:  PALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEP
        P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT+P
Subjt:  PALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEP

Query:  GLYVTLWMFRHVETHKICFAVTAGQ
        G ++++WMFRHV T K+CFA+  GQ
Subjt:  GLYVTLWMFRHVETHKICFAVTAGQ

A0A0A0LC65 TF-B3 domain-containing protein4.0e-3962.3Show/hide
Query:  LAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGL
        +AVI NIIG  SPP+ K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI VTVY+ EGR+YDM FK W SKLYVLTK WN FYK+NNLT PG 
Subjt:  LAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGL

Query:  YVTLWMFRHVETHKICFAVTAG
        ++++WMFRHV   K+CFA+  G
Subjt:  YVTLWMFRHVETHKICFAVTAG

A0A5D3BAS8 Putative B3 domain-containing protein8.9e-3958.99Show/hide
Query:  EEVAEVVAP---VVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLT
        E VA VVA      +P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L+PMFN DE  + GI VTVY+ EGR+YDM F+LW SKLYVLT
Subjt:  EEVAEVVAP---VVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLT

Query:  KGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAG
        K W  FY  N LT P  ++TLWMFRHV  HK+CFA+  G
Subjt:  KGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAG

A0A5N5GPP9 B3 domain-containing protein6.6e-2644.27Show/hide
Query:  APVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTN
        AP  +P +  +  +I A S P+EK+LT SDV + Q RL + KE V NH+ P+   DEDP++G+ VT+Y+ +G++Y M FK W SK+ VLT GWN F +  
Subjt:  APVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTN

Query:  NLTEPGLYVTLWMFRHVETHKICFAVTAGQF
         L E   +VT+W FR+V    +CFA+ + +F
Subjt:  NLTEPGLYVTLWMFRHVETHKICFAVTAGQF

A0A6J1CTE7 putative B3 domain-containing protein At4g031705.6e-3356.92Show/hide
Query:  IPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFN---ADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNN
        +P +  I ++IG  S  +EKRLT SDV+E QGRL + KEFVT +L PMFN    +E+  EGI+VTVYN EGR++ M FK+WASKLYVL KGW  F K NN
Subjt:  IPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFN---ADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNN

Query:  LT--EPGLYVTLWMFRHVETHKICFAVTAG
        LT    G ++TLWMFRH  TH +CFA+  G
Subjt:  LT--EPGLYVTLWMFRHVETHKICFAVTAG

SwissProt top hitse value%identityAlignment
Q9C688 AP2/ERF and B3 domain-containing transcription factor At1g511201.9e-0632.63Show/hide
Query:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADE---DPSEG---IDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYV
        ++K LT SDV +   RL++ K++   + +P  + D+   + SEG   ++V  Y+   RQ+  ++  W +S+ +V T+GWN F K  NL E  + V
Subjt:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADE---DPSEG---IDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYV

Q9C6P5 AP2/ERF and B3 domain-containing transcription factor At1g506803.3e-0631.18Show/hide
Query:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPS---------EGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTE
        ++K LT SDV +   RL++ K++   + +P  +AD+            E ++V  Y+   RQ+  ++  W +S+ +V T+GWN F K  NL E
Subjt:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPS---------EGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTE

Q9LM90 B3 domain-containing protein At1g206008.1e-1340.86Show/hide
Query:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVT
        S P +K+L  SDV   Q RL++ KE V   +LP     EDP +G+DV+VY  +G    M+FK+W   K  VLT GW  F     L +   +VT
Subjt:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVT

Q9ZR14 Putative B3 domain-containing protein At4g031701.8e-2043.12Show/hide
Query:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHV
        S P +K+L  SDV + Q  L++ KE V   +LP     E+P +GIDV+VY  +G+   M+FK+W   K  VLT GW  F +   L+    +VT+WMFRH+
Subjt:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHV

Query:  ETHKICFAV
        +T K+CFA+
Subjt:  ETHKICFAV

Q9ZR15 Putative B3 domain-containing protein At4g031602.3e-1535.19Show/hide
Query:  KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKIC
        ++L  SDV + Q RL++ KE V   +  +   ++  ++G++V+VY   G  + M  K+W     VLT GW +F K+  L +   ++T+WMFRH +T +IC
Subjt:  KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKIC

Query:  FAVTAGQF
        FA+ + +F
Subjt:  FAVTAGQF

Arabidopsis top hitse value%identityAlignment
AT1G20600.1 AP2/B3-like transcriptional factor family protein5.8e-1440.86Show/hide
Query:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVT
        S P +K+L  SDV   Q RL++ KE V   +LP     EDP +G+DV+VY  +G    M+FK+W   K  VLT GW  F     L +   +VT
Subjt:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVT

AT1G50680.1 AP2/B3 transcription factor family protein2.3e-0731.18Show/hide
Query:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPS---------EGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTE
        ++K LT SDV +   RL++ K++   + +P  +AD+            E ++V  Y+   RQ+  ++  W +S+ +V T+GWN F K  NL E
Subjt:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPS---------EGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTE

AT1G51120.1 AP2/B3 transcription factor family protein1.4e-0732.63Show/hide
Query:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADE---DPSEG---IDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYV
        ++K LT SDV +   RL++ K++   + +P  + D+   + SEG   ++V  Y+   RQ+  ++  W +S+ +V T+GWN F K  NL E  + V
Subjt:  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADE---DPSEG---IDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYV

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)1.6e-1635.19Show/hide
Query:  KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKIC
        ++L  SDV + Q RL++ KE V   +  +   ++  ++G++V+VY   G  + M  K+W     VLT GW +F K+  L +   ++T+WMFRH +T +IC
Subjt:  KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKIC

Query:  FAVTAGQF
        FA+ + +F
Subjt:  FAVTAGQF

AT4G03170.1 AP2/B3-like transcriptional factor family protein1.3e-2143.12Show/hide
Query:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHV
        S P +K+L  SDV + Q  L++ KE V   +LP     E+P +GIDV+VY  +G+   M+FK+W   K  VLT GW  F +   L+    +VT+WMFRH+
Subjt:  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHV

Query:  ETHKICFAV
        +T K+CFA+
Subjt:  ETHKICFAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACGAAAACGAAGCTCCATCCATCAACGGCGATGAAGACGTGGCGTTGGAAGTGGAGGAAGTAGCAGAGGTAGTAGCTCCAGTGGTGATTCCGGCGTTGGCGGT
TATTATGAACATAATTGGAGCACGTAGCCCGCCGTGGGAGAAGCGGTTGACGAAAAGCGACGTGTCGGAAGGGCAGGGGAGATTGATAGTACGGAAGGAATTTGTGACGA
ATCATTTGTTGCCAATGTTCAATGCGGATGAGGATCCGAGTGAGGGGATTGATGTTACGGTTTATAATGGTGAAGGGAGACAATACGATATGCAGTTCAAACTCTGGGCT
TCTAAGCTTTACGTCCTCACCAAAGGCTGGAACGACTTTTACAAGACCAATAATTTGACAGAGCCTGGCCTGTATGTCACTCTGTGGATGTTCCGACATGTCGAAACTCA
CAAGATTTGTTTTGCCGTTACTGCCGGACAGTTTGGAGAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACGAAAACGAAGCTCCATCCATCAACGGCGATGAAGACGTGGCGTTGGAAGTGGAGGAAGTAGCAGAGGTAGTAGCTCCAGTGGTGATTCCGGCGTTGGCGGT
TATTATGAACATAATTGGAGCACGTAGCCCGCCGTGGGAGAAGCGGTTGACGAAAAGCGACGTGTCGGAAGGGCAGGGGAGATTGATAGTACGGAAGGAATTTGTGACGA
ATCATTTGTTGCCAATGTTCAATGCGGATGAGGATCCGAGTGAGGGGATTGATGTTACGGTTTATAATGGTGAAGGGAGACAATACGATATGCAGTTCAAACTCTGGGCT
TCTAAGCTTTACGTCCTCACCAAAGGCTGGAACGACTTTTACAAGACCAATAATTTGACAGAGCCTGGCCTGTATGTCACTCTGTGGATGTTCCGACATGTCGAAACTCA
CAAGATTTGTTTTGCCGTTACTGCCGGACAGTTTGGAGAGCCTTGA
Protein sequenceShow/hide protein sequence
MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWA
SKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP