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Carg09834 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09834
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontransmembrane protein 234 homolog
Genome locationCarg_Chr10:2979196..2979594
RNA-Seq ExpressionCarg09834
SyntenyCarg09834
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018908 - Putative transmembrane family 234


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023602.1 Transmembrane protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-62100Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_022961299.1 transmembrane protein 234 homolog [Cucurbita moschata]7.5e-6299.24Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_022987899.1 transmembrane protein 234 homolog [Cucurbita maxima]6.3e-6197.73Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIGI WGATNALMRRGALLWDQALKSSSNATRSSNKLLSS RRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_023516356.1 transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]3.7e-6197.73Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIG+VWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYT+PFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

XP_038879672.1 transmembrane protein 234 homolog [Benincasa hispida]2.7e-5691.67Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T    KLLSSLRRWLKLLSIWQYT+PFL+NLTASATFFAILSDAPISLAVP+TNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGE+TRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

TrEMBL top hitse value%identityAlignment
A0A0A0LT65 Uncharacterized protein6.4e-5184.85Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIG+VWGATN LMRRGALLWDQALKSSS++T    K  SSLRRWLKL SIWQYT+PF +NLTASATFF ILS APISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGE TRVGYALFGT LIG GVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A1S4E4M5 transmembrane protein 234 homolog2.0e-5286.36Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIG+VWGATNALMRRGALLWDQAL+SSS++T    K  SSLRRWLKL SIWQYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFG+LLGE+TRVGYALFGTALIG GVWLCI+
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A5A7VAD4 Transmembrane protein 234-like protein2.0e-5286.36Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIG+VWGATNALMRRGALLWDQAL+SSS++T    K  SSLRRWLKL SIWQYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFG+LLGE+TRVGYALFGTALIG GVWLCI+
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A6J1HBE7 transmembrane protein 234 homolog3.6e-6299.24Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

A0A6J1JK46 transmembrane protein 234 homolog3.1e-6197.73Show/hide
Query:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIGI WGATNALMRRGALLWDQALKSSSNATRSSNKLLSS RRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
        AVFGMLLGEETRVGYALFGTALIGLGVWLCIN
Subjt:  AVFGMLLGEETRVGYALFGTALIGLGVWLCIN

SwissProt top hitse value%identityAlignment
A0NGI1 Transmembrane protein 234 homolog8.4e-0832.58Show/hide
Query:  IGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLK---LLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFA
        I  V  ++ + I+WGATN  ++RG++ +++ LK+ S         L  L  WL+   L++ WQY +P ++N   S  +   L    +SL VP+ N+ TF 
Subjt:  IGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLK---LLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFA

Query:  ATAVFGMLLGEETRVGYALFGTALIGLGVWLC
         TA+   LLGE         G  L+ LG  +C
Subjt:  ATAVFGMLLGEETRVGYALFGTALIGLGVWLC

Q54ZG7 Transmembrane protein 234 homolog3.6e-1132.8Show/hide
Query:  MVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLL
        ++ +G +WG TN L++RG+           +  +  N L   +  ++ L +   YT+P L+NL+ S  FF  LS   ISL VP++N+ TF  T++ GMLL
Subjt:  MVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLL

Query:  GEETRVGYALFGTALIGLGVWLCIN
        GE+     +  G   +  GV +C++
Subjt:  GEETRVGYALFGTALIGLGVWLCIN

Q8R1E7 Transmembrane protein 2348.7e-0527.13Show/hide
Query:  GGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAV
        G V  +V +  +WG T  L++R +        S     R        L+    L    +Y +PFL+N + S  ++  L+   ++LAVP+ N+     T +
Subjt:  GGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAV

Query:  FGMLLGEETRVGYALFGTALIGLGVWLCI
         G +LGE+     A+ G  L   G+ +CI
Subjt:  FGMLLGEETRVGYALFGTALIGLGVWLCI

Arabidopsis top hitse value%identityAlignment
AT5G19570.1 unknown protein2.0e-4162.88Show/hide
Query:  VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRS-----SNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAA
        ++KMVA+G+VWGATNAL+RRGAL WD+   SS+  + S       K++ +LR W+ LL  WQY++PFL+NL+ASATFFA+LS APISLAVPVTNATTFAA
Subjt:  VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRS-----SNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAA

Query:  TAVFGMLLGEETRVGYALFGTALIGLGVWLCI
        TA FG+LLGEET++G AL GT+ I  G+WLC+
Subjt:  TAVFGMLLGEETRVGYALFGTALIGLGVWLCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGGGGTGTAGAGAAAATGGTTGCGATCGGTATAGTCTGGGGCGCCACCAATGCACTGATGCGCCGTGGCGCCCTTCTCTGGGACCAAGCTCTTAAATCTTCGTC
CAATGCAACCCGCTCTTCAAACAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTTTCGATCTGGCAGTATACTGTCCCTTTTTTGGTTAATCTCACCGCCTCAG
CTACTTTCTTTGCCATTCTAAGCGATGCCCCAATATCGCTCGCCGTTCCGGTAACTAACGCCACAACTTTTGCTGCCACCGCTGTTTTCGGAATGCTTCTTGGCGAGGAA
ACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTGATTGGGTTGGGCGTATGGCTTTGCATTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGGGGTGTAGAGAAAATGGTTGCGATCGGTATAGTCTGGGGCGCCACCAATGCACTGATGCGCCGTGGCGCCCTTCTCTGGGACCAAGCTCTTAAATCTTCGTC
CAATGCAACCCGCTCTTCAAACAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTTTCGATCTGGCAGTATACTGTCCCTTTTTTGGTTAATCTCACCGCCTCAG
CTACTTTCTTTGCCATTCTAAGCGATGCCCCAATATCGCTCGCCGTTCCGGTAACTAACGCCACAACTTTTGCTGCCACCGCTGTTTTCGGAATGCTTCTTGGCGAGGAA
ACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTGATTGGGTTGGGCGTATGGCTTTGCATTAACTAA
Protein sequenceShow/hide protein sequence
MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEE
TRVGYALFGTALIGLGVWLCIN