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Carg09855 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09855
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent RNA helicase DDX11-like protein
Genome locationCarg_Chr10:2881021..2882452
RNA-Seq ExpressionCarg09855
SyntenyCarg09855
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589911.1 hypothetical protein SDJN03_15334, partial [Cucurbita argyrosperma subsp. sororia]2.5e-9098.3Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
        MMLRASIANTKKFFNKTLCNFKSFFS+TYQRLPKAPPPFSIGHEMDKDSSFMKN  GNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE

Query:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
        RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
Subjt:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG

KAG7023581.1 hypothetical protein SDJN02_14607, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-104100Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
        MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE

Query:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVGNNNKNNNNVVPQICPNEYSIQ
        RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVGNNNKNNNNVVPQICPNEYSIQ
Subjt:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVGNNNKNNNNVVPQICPNEYSIQ

XP_022960595.1 uncharacterized protein LOC111461329 [Cucurbita moschata]1.3e-9199.43Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
        MMLRASIANTKKFFNKTLCNFKSFFS+TYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE

Query:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
        RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
Subjt:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG

XP_022987886.1 uncharacterized protein LOC111485292 [Cucurbita maxima]2.7e-7687.5Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
        MMLRASI++TKKFFNKTLCNFKSFFS+TYQRLPK          MDKDSSFMKNSNGNAV FSKT+ ETQMKKVEKNEDSIKIG THQRKTQENLK YDE
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE

Query:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
        RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYL+IVDKFFMDIFAEFCAN SSQQTNPIG +SSVG
Subjt:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG

XP_023515883.1 uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo]4.2e-8593.18Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
        M+LRASI+NTKKFFNKTLCN KSFFS+TYQRLPKA PPFSIGHEMDKDSSFMKNSNGNAV FSKT+DETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE

Query:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
        RRMC VAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCAN SSQQ NPIG ESS G
Subjt:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG

TrEMBL top hitse value%identityAlignment
A0A6J1CV44 uncharacterized protein LOC1110145441.5e-5162.69Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSS--------------FMKNSNGNAVRFSKTMDETQM--KKVEKNEDSI-KI
        M+LRASI+NTKKFF KT+CNFKSFFS++Y RLPK PPPF+ G  M+KDS+              FMKN N NA+ F   M+ETQM  + V+K+  S+  I
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSS--------------FMKNSNGNAVRFSKTMDETQM--KKVEKNEDSI-KI

Query:  GVTHQRKTQENLKE-------YDERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPI
        G THQRK QEN           DERRMCLVAKK+KELEKLD+R+VDHALDIEEILHYYSRL+CP YLEIVDKFF +IFAEF ANSSSQ  + I
Subjt:  GVTHQRKTQENLKE-------YDERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPI

A0A6J1F4Y2 uncharacterized protein LOC1114409091.7e-6071.2Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKA-PPPFSIGHEMDKD----SSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQEN-
        M L  SI+ TKKFF KTLCNFKSFFS+TY RLPKA PPPF+ G EM KD     SF K++  NAV FSKT+D+TQM +VEKNE SIKIG THQRKTQEN 
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKA-PPPFSIGHEMDKD----SSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQEN-

Query:  ---------LKEYDERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPI
                 L EYDERR+CLVAKK+KELEKLDAR+V H+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q N I
Subjt:  ---------LKEYDERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPI

A0A6J1H9I9 uncharacterized protein LOC1114613296.5e-9299.43Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
        MMLRASIANTKKFFNKTLCNFKSFFS+TYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE

Query:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
        RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
Subjt:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG

A0A6J1IF62 uncharacterized protein LOC1114722336.0e-6170.49Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKD----SSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQEN--
        M L  SI+ TKKFF KT+CNFKSFFS+TY RLPKA PPF+ G EM KD     SF K++  NAV FSKT+D+TQM +VEKNE SIKIG THQRK+QEN  
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKD----SSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQEN--

Query:  --------LKEYDERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPI
                L EYDERR+CLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q N I
Subjt:  --------LKEYDERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPI

A0A6J1JFL9 uncharacterized protein LOC1114852921.3e-7687.5Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE
        MMLRASI++TKKFFNKTLCNFKSFFS+TYQRLPK          MDKDSSFMKNSNGNAV FSKT+ ETQMKKVEKNEDSIKIG THQRKTQENLK YDE
Subjt:  MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE

Query:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG
        RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYL+IVDKFFMDIFAEFCAN SSQQTNPIG +SSVG
Subjt:  RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein2.4e-1432.74Show/hide
Query:  SIANTKKFFNKTLCNFKS-FFSSTYQRLPKAPP---PFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE-
        SI    +F  KTL + KS   SS Y+ LP   P   P+S      +DS      +   +     + +T  +K   N+        H++K ++  + +++ 
Subjt:  SIANTKKFFNKTLCNFKS-FFSSTYQRLPKAPP---PFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE-

Query:  -RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTN
         +R   +A+KMK+L  +D RDVDHALD+ E L  YS +  P YL+IVD FF D++ EF    +S + N
Subjt:  -RRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTN

AT3G16070.1 unknown protein2.3e-1232.05Show/hide
Query:  TKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSI----GHEMDKDSSFMKNSN------GNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYD
        T  FF++TL + KS      ++LP+    FS      + +D D+ +    N       N++     ++     KV++ E        HQ K  E    Y 
Subjt:  TKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSI----GHEMDKDSSFMKNSN------GNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYD

Query:  ERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFA
         R    + KK+ E+   +  D++ ALD+EE LHYYSR+S P YL IVDKFF D+++
Subjt:  ERRMCLVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFA

AT3G24535.1 unknown protein1.4e-1433.74Show/hide
Query:  MMLRASIANTKKFFNKTLCNFKSFF--SSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEY
        M+LR+SI+NT+K F KT+ NFKSFF  + TY +LPK P   S     D  +S +  S+ +++   K         V  N    K      R    +   +
Subjt:  MMLRASIANTKKFFNKTLCNFKSFF--SSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEY

Query:  DERRMCLVAKKMKELEKLDARDV----DHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEF
         + ++ LV  K+KE+EK+   D+     +  D+ E LH YSRL    YL++V+ FFM+++++F
Subjt:  DERRMCLVAKKMKELEKLDARDV----DHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTACGAGCCTCCATTGCCAACACCAAGAAGTTCTTCAACAAAACCTTATGCAACTTCAAATCCTTCTTCTCCAGTACCTATCAACGGCTTCCCAAGGCGCCGCC
GCCCTTCTCCATCGGCCACGAAATGGATAAAGACTCATCCTTTATGAAGAATAGTAATGGCAATGCAGTTCGTTTTTCGAAGACGATGGACGAGACCCAGATGAAAAAAG
TTGAGAAAAATGAAGATAGCATCAAAATTGGAGTGACCCATCAAAGGAAAACGCAAGAAAATTTGAAAGAGTATGATGAGAGAAGAATGTGTTTGGTTGCTAAGAAAATG
AAAGAGTTGGAAAAGCTAGACGCTAGAGATGTGGATCATGCTTTGGATATTGAAGAGATTCTTCATTACTACTCTCGTCTCTCTTGTCCAACGTATCTTGAGATTGTGGA
CAAGTTCTTCATGGACATTTTTGCTGAATTTTGTGCTAATTCATCTTCTCAACAAACTAACCCAATTGGGAAGGAATCATCAGTGGGGAACAACAACAAGAACAACAACA
ACGTTGTTCCCCAAATATGCCCCAATGAGTATAGTATTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTACGAGCCTCCATTGCCAACACCAAGAAGTTCTTCAACAAAACCTTATGCAACTTCAAATCCTTCTTCTCCAGTACCTATCAACGGCTTCCCAAGGCGCCGCC
GCCCTTCTCCATCGGCCACGAAATGGATAAAGACTCATCCTTTATGAAGAATAGTAATGGCAATGCAGTTCGTTTTTCGAAGACGATGGACGAGACCCAGATGAAAAAAG
TTGAGAAAAATGAAGATAGCATCAAAATTGGAGTGACCCATCAAAGGAAAACGCAAGAAAATTTGAAAGAGTATGATGAGAGAAGAATGTGTTTGGTTGCTAAGAAAATG
AAAGAGTTGGAAAAGCTAGACGCTAGAGATGTGGATCATGCTTTGGATATTGAAGAGATTCTTCATTACTACTCTCGTCTCTCTTGTCCAACGTATCTTGAGATTGTGGA
CAAGTTCTTCATGGACATTTTTGCTGAATTTTGTGCTAATTCATCTTCTCAACAAACTAACCCAATTGGGAAGGAATCATCAGTGGGGAACAACAACAAGAACAACAACA
ACGTTGTTCCCCAAATATGCCCCAATGAGTATAGTATTCAGTGA
Protein sequenceShow/hide protein sequence
MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCLVAKKM
KELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVGNNNKNNNNVVPQICPNEYSIQ