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Carg09862 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09862
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionserine-rich protein-related
Genome locationCarg_Chr10:2848715..2848975
RNA-Seq ExpressionCarg09862
SyntenyCarg09862
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046595.1 hypothetical protein E6C27_scaffold114G001360 [Cucumis melo var. makuwa]1.3e-2780Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES
        M +  K+ ISIPS+AKS GDGDGVA H+CSSK QCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES

KAE8653119.1 hypothetical protein Csa_020123 [Cucumis sativus]8.1e-2579.27Show/hide
Query:  KIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES
        K+ I IPS+AKS G+GDGV   +H+CSSKGQCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  KIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES

KAF3961111.1 hypothetical protein CMV_014232 [Castanea mollissima]4.3e-1051.16Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST
        M++HG + +S  +S KS G+G+ V   + S KGQCLCSPTTH GSFRCR HRS+S  W + SK   ++ + A+     SPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST

KAG6589904.1 hypothetical protein SDJN03_15327, partial [Cucurbita argyrosperma subsp. sororia]5.8e-39100Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST
        MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST

OUZ99929.1 hypothetical protein BVC80_9069g38 [Macleaya cordata]1.1e-1052.87Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST
        M++HG I +S+  S K  G+G  VA A T S KGQCLCSPTTH GSFRCR HRS S  W      +  +++ A+ T+ +SPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ0 Uncharacterized protein7.9e-2675.86Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES
        M +  K+ I IPS+AKS G+GDGV   +H+CSSKGQCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVA--AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES

A0A200PNZ0 Uncharacterized protein5.5e-1152.87Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST
        M++HG I +S+  S K  G+G  VA A T S KGQCLCSPTTH GSFRCR HRS S  W      +  +++ A+ T+ +SPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVA-AHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST

A0A5D3BJV5 Uncharacterized protein6.5e-2880Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES
        M +  K+ ISIPS+AKS GDGDGVA H+CSSK QCLCSPTTHPGSFRCRLHRSNSLPW+R SK+TA +SADAS+TSDLSPKSVES
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES

A0A5N6QHE2 Uncharacterized protein1.4e-0951.16Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST
        M++HG + +S  +S KS G  + V   + S KGQCLCSPTTH GSFRCR HRS+S  W + SK   S  A  S  + +SPKS+EST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST

A0A7N2L171 Uncharacterized protein3.9e-0951.16Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST
        M++HG +++S  +S KS G G+ V   T S KGQCLCSPTTH GSFRC+ HRS+S  W + SK+   + + A+     SPKSVEST
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein1.2e-0537.68Show/hide
Query:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSS
        M+  G +      +A  +G   G++  T  +K  C+CSPTTHPGSF+C+LHR+ SL   +  +T    S
Subjt:  MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSS

AT1G67910.1 unknown protein1.6e-0746.58Show/hide
Query:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES
        +SA  VG   G++  T  +K  CLCSPTTHPGSFRCR+HRS SL  T+        S +A+   D  PK  +S
Subjt:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES

AT1G67910.2 unknown protein1.6e-0746.58Show/hide
Query:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES
        +SA  VG   G++  T  +K  CLCSPTTHPGSFRCR+HRS SL  T+        S +A+   D  PK  +S
Subjt:  SSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVES

AT5G25280.1 serine-rich protein-related2.6e-0556.76Show/hide
Query:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTAS
        S+ +C+CSPTTHPGSFRC LH++ + P   H + TAS
Subjt:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTAS

AT5G25280.2 serine-rich protein-related2.6e-0556.76Show/hide
Query:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTAS
        S+ +C+CSPTTHPGSFRC LH++ + P   H + TAS
Subjt:  SKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCCCACGGAAAAATCAGGATCAGCATCCCTTCCTCCGCCAAAAGCGTTGGCGACGGTGACGGCGTGGCGGCTCACACATGTTCATCCAAAGGCCAATGCCTCTG
CTCGCCCACCACTCATCCTGGATCCTTCCGTTGTCGTCTTCACCGTTCCAATTCGTTGCCCTGGACCAGGCACTCCAAGACCACTGCGTCGTCTTCGGCCGACGCCTCTC
ACACCTCAGATCTTTCTCCCAAGTCAGTTGAATCTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCCCACGGAAAAATCAGGATCAGCATCCCTTCCTCCGCCAAAAGCGTTGGCGACGGTGACGGCGTGGCGGCTCACACATGTTCATCCAAAGGCCAATGCCTCTG
CTCGCCCACCACTCATCCTGGATCCTTCCGTTGTCGTCTTCACCGTTCCAATTCGTTGCCCTGGACCAGGCACTCCAAGACCACTGCGTCGTCTTCGGCCGACGCCTCTC
ACACCTCAGATCTTTCTCCCAAGTCAGTTGAATCTACTTGA
Protein sequenceShow/hide protein sequence
MSAHGKIRISIPSSAKSVGDGDGVAAHTCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRHSKTTASSSADASHTSDLSPKSVEST