; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09877 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09877
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontudor domain-containing protein 3
Genome locationCarg_Chr10:2752740..2753660
RNA-Seq ExpressionCarg09877
SyntenyCarg09877
Gene Ontology termsNA
InterPro domainsIPR013894 - RecQ mediated genome instability protein, N-terminal
IPR033472 - RecQ mediated genome instability protein, DUF1767
IPR042470 - RecQ mediated genome instability protein, N-terminal, subdomain 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589889.1 Protein PGR, partial [Cucurbita argyrosperma subsp. sororia]3.2e-68100Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

KAG7023559.1 Tudor domain-containing protein 3 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-89100Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKVFRIISPCMSFQLLYFEELKFLIFLKYKFLIEVDCPD
        SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKVFRIISPCMSFQLLYFEELKFLIFLKYKFLIEVDCPD
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKVFRIISPCMSFQLLYFEELKFLIFLKYKFLIEVDCPD

XP_022961249.1 tudor domain-containing protein 3 [Cucurbita moschata]3.2e-68100Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

XP_022987733.1 tudor domain-containing protein 3 isoform X1 [Cucurbita maxima]1.5e-6596.4Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASV+VLETLRVRGW FGDLDEVR VIMIGSALADDPT VVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        SNDRRLLRFGLTDGHTEITAIEYSHIPS PDDIPPGTKV
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

XP_023516947.1 tudor domain-containing protein 3 [Cucurbita pepo subsp. pepo]3.5e-6798.56Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASV+VLETLRVRGWNF DLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

TrEMBL top hitse value%identityAlignment
A0A1S3CJF1 tudor domain-containing protein 3 isoform X26.5e-5985.61Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASV+VLETLR+RGWNF D DEV+AVIMIGSALADDP+SVVDSVESELINMDLRSIGGKSL + +LLRKSSR+LGP+VLQISSV+DISRSSLDG+ KA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        SN RRLLRFGLTDGH+E+TAIEYSHIP IPDDIPPGTK+
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

A0A1S4E471 tudor domain-containing protein 3 isoform X11.1e-5885.11Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASV+VLETLR+RGWNF D DEV+AVIMIGSALADDP+SVVDSVESELINMDLRSIGGKSL + +LLRKSSR+LGP+VLQISSV+DISRSSLDG+ KA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKVFR
        SN RRLLRFGLTDGH+E+TAIEYSHIP IPDDIPPGTK  R
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKVFR

A0A5D3BLA9 Tudor domain-containing protein 3 isoform X23.8e-5982.43Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASV+VLETLR+RGWNF D DEV+AVIMIGSALADDP+SVVDSVESELINMDLRSIGGKSL + +LLRKSSR+LGP+VLQISSV+DISRSSLDG+ KA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV-FRIISPCM
        SN RRLLRFGLTDGH+E+TAIEYSHIP IPDDIPPGTK+ F I + C+
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV-FRIISPCM

A0A6J1HDH5 tudor domain-containing protein 31.5e-68100Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

A0A6J1JKA7 tudor domain-containing protein 3 isoform X17.1e-6696.4Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        MADASV+VLETLRVRGW FGDLDEVR VIMIGSALADDPT VVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        SNDRRLLRFGLTDGHTEITAIEYSHIPS PDDIPPGTKV
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

SwissProt top hitse value%identityAlignment
Q2HJG4 Tudor domain-containing protein 36.1e-0641.27Show/hide
Query:  GPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        GP VLQI  +R+++    +  ++A+   R+LR  +TDGH   TA+E+S++  I  + PPGTKV
Subjt:  GPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

Q5ZMS6 Tudor domain-containing protein 32.4e-1042.7Show/hide
Query:  INMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        +N DLR+IG K LP      K  ++ GP VLQI  +R++S    +  ++A+   R+LR  +TDGHT  TAIEY+ +  I  + PPGTK+
Subjt:  INMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

Q6NYG6 Tudor domain-containing protein 31.3e-0831.65Show/hide
Query:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA
        M D S ++++     GW   D      +    S+   + TS  D ++  L N DLR IG   LP      +  ++ GP VLQ+  +R+++ S     ++A
Subjt:  MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKA

Query:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        +   R+LR  +TDGHT  T +E+  +  I  + PPGTKV
Subjt:  SNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

Q6P1U3 Tudor domain-containing protein 34.1e-1043.82Show/hide
Query:  INMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        +N DLR+ G K LP+     K  +V GP VLQI  +R+IS    +  ++A+   R+LR  LTDGHT  TAIE +++  I  + PPGTK+
Subjt:  INMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

Q91W18 Tudor domain-containing protein 31.4e-1043.82Show/hide
Query:  INMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        +N DLR+IG K LP      K  ++ GP VLQI  VR+++    +  ++A+   R+LR  +TDGHT  TA+E+S+I  I  + PPGTKV
Subjt:  INMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDRRLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

Arabidopsis top hitse value%identityAlignment
AT5G19950.1 Domain of unknown function (DUF1767)5.6e-3149.63Show/hide
Query:  VLETLRVRGWNFGDLDEVRAVIMIGSAL---ADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDR
        V+  L  RGW F D++ +++++   S+L    +   ++V+SVE+EL+NMD++ IGGKSLPD + LR+ S + GP VLQIS VRD++RSS +    +S  +
Subjt:  VLETLRVRGWNFGDLDEVRAVIMIGSAL---ADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDR

Query:  RLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        R+L+F LTDG TEI+A+EYSHIP+I +D+ PGTKV
Subjt:  RLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

AT5G19950.2 Domain of unknown function (DUF1767)5.6e-3149.63Show/hide
Query:  VLETLRVRGWNFGDLDEVRAVIMIGSAL---ADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDR
        V+  L  RGW F D++ +++++   S+L    +   ++V+SVE+EL+NMD++ IGGKSLPD + LR+ S + GP VLQIS VRD++RSS +    +S  +
Subjt:  VLETLRVRGWNFGDLDEVRAVIMIGSAL---ADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDR

Query:  RLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        R+L+F LTDG TEI+A+EYSHIP+I +D+ PGTKV
Subjt:  RLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV

AT5G19950.3 Domain of unknown function (DUF1767)5.6e-3149.63Show/hide
Query:  VLETLRVRGWNFGDLDEVRAVIMIGSAL---ADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDR
        V+  L  RGW F D++ +++++   S+L    +   ++V+SVE+EL+NMD++ IGGKSLPD + LR+ S + GP VLQIS VRD++RSS +    +S  +
Subjt:  VLETLRVRGWNFGDLDEVRAVIMIGSAL---ADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDR

Query:  RLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV
        R+L+F LTDG TEI+A+EYSHIP+I +D+ PGTKV
Subjt:  RLLRFGLTDGHTEITAIEYSHIPSIPDDIPPGTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGCTTCTGTTTCTGTGCTTGAAACATTACGAGTGAGAGGATGGAATTTCGGCGATTTGGACGAAGTTAGGGCCGTAATCATGATCGGTAGTGCCTTGGCCGA
TGATCCGACTTCGGTCGTTGATTCGGTGGAGTCGGAGCTCATAAACATGGACCTTAGGTCCATTGGAGGCAAGTCCTTGCCTGACCTTTCTCTTCTTCGCAAGTCTTCTC
GTGTTCTTGGCCCTCTGGTTCTCCAGATATCATCAGTAAGAGACATATCGCGAAGTAGCCTAGACGGTATGACGAAGGCTTCTAATGATCGGCGTCTCCTACGGTTCGGT
CTCACTGATGGACACACTGAAATTACTGCTATAGAGTACTCTCATATACCATCTATTCCTGATGACATTCCTCCTGGCACCAAGGTATTCCGGATAATTTCTCCTTGCAT
GTCTTTCCAGCTACTCTATTTTGAAGAGTTAAAGTTCTTGATCTTTTTAAAGTACAAGTTCTTGATAGAAGTTGATTGTCCTGATTAA
mRNA sequenceShow/hide mRNA sequence
AGTAATTAGGAATTAGGATCTAACCTCAAACTTCTACCGCCTCGAATTACCGATATCAGGCCGGTCAGTGAAGGGGGGCAAGTGCACATTCCAGCGCTGAGGCGATGGCT
GATGCTTCTGTTTCTGTGCTTGAAACATTACGAGTGAGAGGATGGAATTTCGGCGATTTGGACGAAGTTAGGGCCGTAATCATGATCGGTAGTGCCTTGGCCGATGATCC
GACTTCGGTCGTTGATTCGGTGGAGTCGGAGCTCATAAACATGGACCTTAGGTCCATTGGAGGCAAGTCCTTGCCTGACCTTTCTCTTCTTCGCAAGTCTTCTCGTGTTC
TTGGCCCTCTGGTTCTCCAGATATCATCAGTAAGAGACATATCGCGAAGTAGCCTAGACGGTATGACGAAGGCTTCTAATGATCGGCGTCTCCTACGGTTCGGTCTCACT
GATGGACACACTGAAATTACTGCTATAGAGTACTCTCATATACCATCTATTCCTGATGACATTCCTCCTGGCACCAAGGTATTCCGGATAATTTCTCCTTGCATGTCTTT
CCAGCTACTCTATTTTGAAGAGTTAAAGTTCTTGATCTTTTTAAAGTACAAGTTCTTGATAGAAGTTGATTGTCCTGATTAA
Protein sequenceShow/hide protein sequence
MADASVSVLETLRVRGWNFGDLDEVRAVIMIGSALADDPTSVVDSVESELINMDLRSIGGKSLPDLSLLRKSSRVLGPLVLQISSVRDISRSSLDGMTKASNDRRLLRFG
LTDGHTEITAIEYSHIPSIPDDIPPGTKVFRIISPCMSFQLLYFEELKFLIFLKYKFLIEVDCPD