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Carg09900 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09900
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr10:2625273..2627962
RNA-Seq ExpressionCarg09900
SyntenyCarg09900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589863.1 hypothetical protein SDJN03_15286, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4270.14Show/hide
Query:  DESCFRGDGGDSRFSTEIEGVATKIESGKVIDGVGSYVYFGSVLVQVQRDLLSKEFEILSLKVMQFIVVYVPRANPVSRFPSRWDACIRSILIGTHHVGA
        DESCFRGDGGDSRFSTEIEGVATKIESGKV+                                          ANPVSRFPSRWDACIRSILIGTHHVGA
Subjt:  DESCFRGDGGDSRFSTEIEGVATKIESGKVIDGVGSYVYFGSVLVQVQRDLLSKEFEILSLKVMQFIVVYVPRANPVSRFPSRWDACIRSILIGTHHVGA

Query:  IITRIDGLKCTTSKAVRAAGVIVSSAADGSAVPVSGQHLRLVVT
        IITRIDGLKCTTSKAVRAAGVIVSSAADGSAVPVSGQHLRLVVT
Subjt:  IITRIDGLKCTTSKAVRAAGVIVSSAADGSAVPVSGQHLRLVVT
KAG7023536.1 hypothetical protein SDJN02_14562, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-127100Show/hide
Query:  FCKKKNSLDRKWTLLSGLERSCLSISLKSGTLFITNRRLSLISFALIIFFLLSALTLNSIPFLYFTDDESCFRGDGGDSRFSTEIEGVATKIESGKVIDG
        FCKKKNSLDRKWTLLSGLERSCLSISLKSGTLFITNRRLSLISFALIIFFLLSALTLNSIPFLYFTDDESCFRGDGGDSRFSTEIEGVATKIESGKVIDG
Subjt:  FCKKKNSLDRKWTLLSGLERSCLSISLKSGTLFITNRRLSLISFALIIFFLLSALTLNSIPFLYFTDDESCFRGDGGDSRFSTEIEGVATKIESGKVIDG

Query:  VGSYVYFGSVLVQVQRDLLSKEFEILSLKVMQFIVVYVPRANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVRAAGVIVSSAADGSAVP
        VGSYVYFGSVLVQVQRDLLSKEFEILSLKVMQFIVVYVPRANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVRAAGVIVSSAADGSAVP
Subjt:  VGSYVYFGSVLVQVQRDLLSKEFEILSLKVMQFIVVYVPRANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVRAAGVIVSSAADGSAVP

Query:  VSGQHLRLVVTKTLGPTGNPVGKSSESLRHTGLDIPNLNLQ
        VSGQHLRLVVTKTLGPTGNPVGKSSESLRHTGLDIPNLNLQ
Subjt:  VSGQHLRLVVTKTLGPTGNPVGKSSESLRHTGLDIPNLNLQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTGTAAAAAAAAAAACAGCCTAGACAGAAAATGGACTCTGCTGAGCGGATTGGAAAGGTCATGTTTATCGATATCTTTGAAGAGTGGAACTTTGTTCATCACGAATCG
TCGGTTGAGTTTAATTTCGTTTGCTTTGATAATTTTTTTTTTACTATCTGCTCTGACTCTGAATTCCATCCCGTTCTTGTATTTTACAGATGATGAATCTTGTTTCCGAG
GCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATAGATGGTGTTGGTAGCTATGTGTATTTTGGATCTGTT
CTTGTACAAGTTCAGCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGTTTATTGTTGTGTATGTACCTAGGGCAAACCCAGTCTCCAGATT
TCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTC
GGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTAAAACGTTGGGCCCGACGGGCAACCCG
GTTGGTAAGAGCTCGGAGTCTCTTAGGCATACCGGCTTAGATATCCCAAATTTGAATCTTCAG
mRNA sequenceShow/hide mRNA sequence
TTTTGTAAAAAAAAAAACAGCCTAGACAGAAAATGGACTCTGCTGAGCGGATTGGAAAGGTCATGTTTATCGATATCTTTGAAGAGTGGAACTTTGTTCATCACGAATCG
TCGGTTGAGTTTAATTTCGTTTGCTTTGATAATTTTTTTTTTACTATCTGCTCTGACTCTGAATTCCATCCCGTTCTTGTATTTTACAGATGATGAATCTTGTTTCCGAG
GCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATAGATGGTGTTGGTAGCTATGTGTATTTTGGATCTGTT
CTTGTACAAGTTCAGCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGTTTATTGTTGTGTATGTACCTAGGGCAAACCCAGTCTCCAGATT
TCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTC
GGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTAAAACGTTGGGCCCGACGGGCAACCCG
GTTGGTAAGAGCTCGGAGTCTCTTAGGCATACCGGCTTAGATATCCCAAATTTGAATCTTCAG
Protein sequenceShow/hide protein sequence
FCKKKNSLDRKWTLLSGLERSCLSISLKSGTLFITNRRLSLISFALIIFFLLSALTLNSIPFLYFTDDESCFRGDGGDSRFSTEIEGVATKIESGKVIDGVGSYVYFGSV
LVQVQRDLLSKEFEILSLKVMQFIVVYVPRANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVRAAGVIVSSAADGSAVPVSGQHLRLVVTKTLGPTGNP
VGKSSESLRHTGLDIPNLNLQ